Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1339 ATGTGGTTTTTGATGTCAAGCTTCAAACTTGTCTATGTTGTAAACTTGGGTTTTCTGGCTTTGAGTTGCTTTGAAGGATTTGAATCCAACGCTCAACTCATACCAAAAGAAGAAGTGGAAGTTCTACAAGCAATATCAGATAAACTAGAGAACTTGAATTGGAAAGTTACAGAACGTTCCTGCATGGAGATTGGAGGATTTGATGGCAAAGTTAATAAAGATGATGACATTGTAAGGAATGTCACATGTGATTGTACTTTCCATTCTAGCACCGTTTGCCATGTTACCAACATCTTCCTCAAGGGTCTAAATTTATCTGGAGTTGTGCCTAGTGAATTTGGAAGTCTCACTCAACTGCAAGTACTTGATCTCACTCACAATTATCTCAATGGCTCAATTCCTAAGAGTTTTGTGCATACATCGCTCACCATTTTGTCCCTTTTGGGAAATCGAATAAGCGGTTCAATTCCCGCAGAAATTGGTGAGATTGCTAATCTGGAGAGCCTGAATTTAGAAAATAATCTACTTGGAGGACCACTTCCTCCCAGTCTTGGAAATTTGAGCAAGTTGAAGAGATTACTTCTTTCTGCAAATAATTTCACAGGGACAATACCAGAAACATTTAGCAAACTGAAGAATCTCACCGATTTTAGGATAGATGGGAACAGTTTATCTGGAAAGATCCCCATTTTCATAGGGAACTGGACCAACCTCCAAAGATTGGATCTGCAAGGAACATCTATGGAAGGCCCGATTCCCTCCACCATATCCGAGTTGAAAAATTTGACTGAATTGAGAATAACTGATTTGAATGGACCAACTATGACATTTCCTAATCTGAAGGATTTGACGAACTTGAAGCGACTGGAATTGAGAAATTGCTTGATCACTGGTCCCATTCCAGATTACATTGGTGAACTAACAAGATTAAAATCTTTAGACCTAAGCTTCAATATGTTGACTGGTTCAATCCCAAATTCAATTCATGGCTTGAAAGAGCTAGATTACCTGTTTCTGACTAACAATTCTCTGACGGGACCGATTCAAGACTGGATACTAGACTGGAAACATAATATGGATTTATCGTACAACAATTTTACGAAGTCTTCTGCAACTAGCTGCCAGATCTCGGATTTGAACTTAGCTTCAAGCCATTCTTCTTCAGCAATCACTTCAAATTTTTGTTTGAGGAAGAACCTACCTTGTCCAGGAAAACCCCAGTATTATTCATTGTTCATAAATTGTGGCGGACCTAAAGGGGAGTTTGAGGGAATTCACTACGTAGACGATCTCCAGCGAGATGGTATTTCAAACTTTGTTCTTAGAAATGAAGACCAATGGGCTTATAGCAGCACGGGAGTATATCTAGGAAATGATGCTGCTAATCATGTAGCAGCAAACAAATTTTCTTTGAACATTAGCGGCCCAGAATACTACCAAACTGCCCGCACTTCCCCTCTATCACTGAAGTACTATGGCCTTTGTATGCGGAAGGGAAATTATAAAGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACGTCTAGCAGTCTTGGAAGGCGCATATTTGATGTTTCAATTCAAGGTTTTAAATATTTGAAAGATTTTAACATCATGGAAGCAATAGGTGGGGTTGGTAAGGGAATCACTAAGGAATTTGATGTGGATGTTAATGATAGTACCTTGGAAATCCACTTATACTGGGGAGGGAAAGGAACTACTGCTGTTCCTGACAGAGGTGTATATGGGCCTCTCATATCTGCTATCACGGTGACACCAAACTTTAAAATTAAATCAGGAGGGTTGTCTGCTGGAGCTATTGGTGGAATTGTAGCGGCATCATGTGTGTTTGTCATACTGATACTGGTTGCCCTCCGGAAGATGGGTTTCCTTGGTGGGAAAGATAAAACAGACAAAGAACTCCTAGATCTGAAAACGGGTTATTTCAGCTTAAGACAAATTAAAGCAGCTACTAATAACTTTGACCAAGCAAATAAAATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTGTACTGCCAGATGGAGATGTGATTGCTGTTAAGCAGCTCTCATCCAAATCAAAGCAAGGGAACCGTGAATTTGTTAATGAAATCGGAATGATATCTGCTTTGCAGCATCCAAACCTTGTGAATCTTTACGGCTGCTGCATTGAAGGAAACCAGTTGCTGCTAATATATGAATACATGGAGAACAATAGTCTTGCGCGTGCACTCTTTGGTAAACAAGAACAGAAGCTGAACTTAGACTGGCACACAAGAATGAAGATTTGTGTGGGGATAGCGAGGGGATTAGCTTATCTCCATGAAGAATCAAGGTTGAAAATAGTACACAGGGACATTAAGGCGACCAATGTCTTACTTGATAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCGAAGCTTGATGATGAAGAGAATACCCATATCAGCACACGAATAGCGGGAACAATTGGTTACATGGCTCCTGAATATGCTATGAGGGGTTACTTGACTGACAAGGCAGATGTTTATAGCTTCGGAATTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGGCCAAAAGAAGAGTTTGTGTATCTTCTGGATTGGGCCTATGTTCTCCATGAGCAAGGAAACCTTCTGGATTTGGTGGATTCAGGTCTTGGTTCAAGTTACTCTTCAGAGGAGGCAATGAGAATGCTGAGCTTGGCTCTCTTATGCACCAATCCATCTCCAACTCTTAGACCATCAATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAACTCCGATTCAAGCATCGATAGTCATGTGCGGTGAGAGTAGCGAGAGTAACCAAGATGCAAGGTTTAAAGCCTTGCAGTTGCTATCACAAGACAGCCAAACTCTTGTTTCTTCTCAATTCTCACAAGAAAGTATGCATGAAAGAGACAAATCAGTTGATGGGCCATGGATTGACTCCTCCTTATCACTTCCAAGTGTAGATCATAATTCTTCAACCAGCAAACTTCTTTGA 3045 0.4049 MWFLMSSFKLVYVVNLGFLALSCFEGFESNAQLIPKEEVEVLQAISDKLENLNWKVTERSCMEIGGFDGKVNKDDDIVRNVTCDCTFHSSTVCHVTNIFLKGLNLSGVVPSEFGSLTQLQVLDLTHNYLNGSIPKSFVHTSLTILSLLGNRISGSIPAEIGEIANLESLNLENNLLGGPLPPSLGNLSKLKRLLLSANNFTGTIPETFSKLKNLTDFRIDGNSLSGKIPIFIGNWTNLQRLDLQGTSMEGPIPSTISELKNLTELRITDLNGPTMTFPNLKDLTNLKRLELRNCLITGPIPDYIGELTRLKSLDLSFNMLTGSIPNSIHGLKELDYLFLTNNSLTGPIQDWILDWKHNMDLSYNNFTKSSATSCQISDLNLASSHSSSAITSNFCLRKNLPCPGKPQYYSLFINCGGPKGEFEGIHYVDDLQRDGISNFVLRNEDQWAYSSTGVYLGNDAANHVAANKFSLNISGPEYYQTARTSPLSLKYYGLCMRKGNYKVKLHFAEIMFSDDQTSSSLGRRIFDVSIQGFKYLKDFNIMEAIGGVGKGITKEFDVDVNDSTLEIHLYWGGKGTTAVPDRGVYGPLISAITVTPNFKIKSGGLSAGAIGGIVAASCVFVILILVALRKMGFLGGKDKTDKELLDLKTGYFSLRQIKAATNNFDQANKIGEGGFGPVYKGVLPDGDVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVNLYGCCIEGNQLLLIYEYMENNSLARALFGKQEQKLNLDWHTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDDEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGIVALEIVSGKSNTNYRPKEEFVYLLDWAYVLHEQGNLLDLVDSGLGSSYSSEEAMRMLSLALLCTNPSPTLRPSMSSVVSMLEGKTPIQASIVMCGESSESNQDARFKALQLLSQDSQTLVSSQFSQESMHERDKSVDGPWIDSSLSLPSVDHNSSTSKLL* 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1339 1014 Pfam Protein tyrosine and serine/threonine kinase 667 935 IPR001245 GO:0004672|GO:0006468
Lan8g1339 1014 Gene3D Ribonuclease Inhibitor 273 399 IPR032675 -
Lan8g1339 1014 SUPERFAMILY Protein kinase-like (PK-like) 648 936 IPR011009 -
Lan8g1339 1014 Gene3D Transferase(Phosphotransferase) domain 1 740 947 - -
Lan8g1339 1014 Pfam Leucine rich repeat 284 344 IPR001611 GO:0005515
Lan8g1339 1014 ProSiteProfiles Protein kinase domain profile. 664 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1339 1014 Pfam Malectin domain 410 592 IPR021720 -
Lan8g1339 1014 Gene3D - 407 597 - -
Lan8g1339 1014 Gene3D Ribonuclease Inhibitor 205 272 IPR032675 -
Lan8g1339 1014 Gene3D Ribonuclease Inhibitor 38 204 IPR032675 -
Lan8g1339 1014 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 73 988 - -
Lan8g1339 1014 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1339 1014 PANTHER - 73 988 - -
Lan8g1339 1014 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Lan8g1339 1014 CDD STKc_IRAK 670 937 - -
Lan8g1339 1014 Gene3D Phosphorylase Kinase; domain 1 633 739 - -
Lan8g1339 1014 SMART LRR_typ_2 307 330 IPR003591 -
Lan8g1339 1014 SMART LRR_typ_2 116 139 IPR003591 -
Lan8g1339 1014 SMART LRR_typ_2 187 210 IPR003591 -
Lan8g1339 1014 Pfam Leucine Rich Repeat 165 187 IPR001611 GO:0005515
Lan8g1339 1014 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515
Lan8g1339 1014 MobiDBLite consensus disorder prediction 1000 1014 - -
Lan8g1339 1014 SUPERFAMILY L domain-like 83 371 - -
Lan8g1339 1014 MobiDBLite consensus disorder prediction 976 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1339 Lan-Chr8 20230526 20239200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1339 1 1005 Receptor kinase-like Gene Family AT1G53440 62.598 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan8g1339 PK_Tyr_Ser-Thr 1.6e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1339 8 20230526 20239200 Lan8g1339 8 20230526 20239200 ECH
Lan7g0634 7 4998653 5009436 Lan8g1339 8 20230526 20239200 LSH