Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1338 ATGTTAATTCAGATGGCATTCTATTCTTGGTTATGTTCTATTGCAAATGCCTTCGTTGTTCTATGGGCATTGACACTTTCACTGAACCAAGTGCATGGTGTGATTATTCAGTCTAACCATCCTGAAAGAGGGTGTGATTTTTCTGTTGGAAGTTGGGTTATTGATTCCCACCAACCTTTCTATGATGCCTCAAGAGGTTGTCCATTTATAGTACAAGGATTTAATTGTCTTGGAAATGGTAGACCTGATCAGGAATATGTTAAGTATAAATGGAAACCCTTTGGTTGTCACCTTCCAAGGTTTGATGGCAAGAAAATGTTGGAGAGATACAGAGGAAAGAAGATAATGTTTGTAGGGGACTCACTAAGCAATAATATGTGGCAGTCACTCACTTGTTTGCTTCACACTGCAGTACCAAATTCAGATTACACCTTAACTACACAAACAAAGCAACTTTCTGTATTCTTCTTTCCGGAATATCAAGCTTCAATAATGTGGTTGAAAGATGGGTTCTTAGTAGATGTAGTTCATGATAAAGAGAAAGGTAGAATTGTAAAATTGGACTCTGTTAGATCTGGGGACCAATGGAAAGGAGTAGATGCATTGATTTTCAATACCTACCATTGGTGGACTCACATAGGAGAGACTCAAACACACTTTCAATTAGGCAGTGAGATAGTGGACATGGATCACTTGGAAGCTTTCAGGATTGGGTTAACCACTTGGGCTAAATGGATTGACTCTAATATTGATCCTTCAAGGACAAGTGTTTTGTTCCAAGGAATTGCTGCAACCCATTATGATGGAAATGGATGTGCTGGACAAACAAACCCAATGCAAGGATCACAACCACCATATCCGGGTGCTGACATTGTAAAGAACATTTTGCATAGCATGAAAAATCCGATTCATTTGCTCGACATTACTTTGCTGACACAGCTGAGAATAGATGGTCACCCTTCTTTATACAGCGGCCGTGGCGCTTCGTATGTGGATTGCAGCCACTGGTGTCTTGCTGGTGTTCCTGATACTTGGAATGAATTCTTGTATGCTGCTCTCATAGGAAGATAA 1071 0.4006 MLIQMAFYSWLCSIANAFVVLWALTLSLNQVHGVIIQSNHPERGCDFSVGSWVIDSHQPFYDASRGCPFIVQGFNCLGNGRPDQEYVKYKWKPFGCHLPRFDGKKMLERYRGKKIMFVGDSLSNNMWQSLTCLLHTAVPNSDYTLTTQTKQLSVFFFPEYQASIMWLKDGFLVDVVHDKEKGRIVKLDSVRSGDQWKGVDALIFNTYHWWTHIGETQTHFQLGSEIVDMDHLEAFRIGLTTWAKWIDSNIDPSRTSVLFQGIAATHYDGNGCAGQTNPMQGSQPPYPGADIVKNILHSMKNPIHLLDITLLTQLRIDGHPSLYSGRGASYVDCSHWCLAGVPDTWNEFLYAALIGR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1338 356 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 9 355 - -
Lan8g1338 356 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 98 351 IPR026057 GO:0016740
Lan8g1338 356 Pfam PMR5 N terminal Domain 44 97 IPR025846 -
Lan8g1338 356 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 355 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1338 Lan-Chr8 20224432 20226972 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1338 8 20224432 20226972 Lan8g1338 8 20224432 20226972 ECH
Lan7g0638 7 5085560 5088191 Lan8g1338 8 20224432 20226972 LSH
Lan8g1338 8 20224432 20226972 Lan13g0609 13 4965280 4968147 LSH
Lan9g0237 9 3097077 3102804 Lan8g1338 8 20224432 20226972 PCT
Lan8g1338 8 20224432 20226972 Lan9g0237 9 3097077 3102804 PCT