Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1332 ATGGGCACTGATGCAATGGGTATTGATGGGTATTCTCTGCTTAAGGATTTAAGGTTGGAAATTGAAGCAAAGGAAGGAACTTTCTCTCTCTGCTTTTGGGTTTATTTGACGAGCTCCACTACATTCCCTGCCACCGTTATTCAACAGGTTTACTCTGATATCTCCAAGAGTGCTCCTTTTCTTGTAATTAACGATAATAAGAGAATCAATCTCTTACCAGTTCTGATTTTACATAAAGAAGCTCCTGACACTTTCAATATCAATTCCTGGACAGAAGTTCCACATGCAACTGTAGATTTAGAATTTCCAGTGGGAAAATGGGTTCATGTTGGATGTGAGGTTTCTCCAAGCCATGTCCAGCTTCAGATTAATGGAGATATTGTAGGAAAAAGGTCTCTTACTTACTTATTAAATAGCGAACCTGATTCAAGTAATTTGAAGAAAATAACTTTGGCAAATGTTGGTGGAGATGAAAATAGTGTTCAGGGTTATGTGCACAATTTTGAAGTCTTCCCTCTTGTTTCTTCTATTATGGATCACCATTTAAAGGATCCTCCTTTGAAGTTATCAATTGATGAATCATCTGCTTCCGAGATTGAAGAAGAAAATGATGGTGTTTGGGGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCCTTTGGCCAGCCAGTAGATAAGGAGAATGAGGTTTTTGCTTCACTTTTGTATGCTGACACGGGGGCACCGGTGGAGAACACAACTGATGAAGAAGCACCCCTTTTGGTTAGCTATGATGGAATTGAATTTTCATCTTGTGAAAGACCAAGTAAACTTTTGATGGGGCGTGCATCATTTAAGCTCAAGATATCTCAGCTTTCATCTAAGTGTGATAACAGGTTATTCATCCTCAGATTTTGTGTTCCGAAATTGGGGAGTTATTCTTTTCTTGAGGCATACTCCCGTCCAGTTCGATGCATCTCCAGGAGCCGTAACACACGATTGTCCACTCTGGTGTGGAAAAGGTCAACTTCTGCACTTAATCGACTTAGTTTATCACAATGTTCAGCAAAGGATGCTGGGCCATTGGAACATCAGCATTCTGATCATGAAGCAAAAGCCAATCCACTGATGAAGCGGTTTAGACTTGGACAAGACAAAATATCAGTATCAGTGAAGGCTGACCCCAACTTAGTGCGACCTGATGAGGAATGTAATTCTCATGTCTTCACTTCTAATCAGGTTGAGAACGGGTTTACAACAAACTTGGATGGAAGACCTGCTAATTTTGATGAAGTATATGATTGTCCATCGGATTCAGAGAGTATAGGGGAGAGAAACTCACCTCCAGATAGTATGGCAAGTAGAAGATATGAAATATCTGATATGACCATTTTCAAATACTGCCTGGCAGGTTTGGCTGACAGATCTCTCATGCTTAAAGAAATTGCTCCTTCCGCTTCTGACAAAGAAATTTCAGAGTTGGCTCATCATGTGTCACTCTATTCAGGATGTTCACACCATGGAAACCAAATATTAATTGCGAAAAGATTGATCAAAGATGGTATTAATCTGTGGAAGTTGATGTCTCCAAATAACCAGCACATTCCTTGGCAGAATGCAGTCTATGAGATTGAAGACCAATTCTTGAAGATTGCTTCTTCTCGATCAAGGTCTCTCTCAATTCAGGATTTAGAGCTTCTGAGAAGGATTTCTGGATGTCAAGAGTATCTTACCCAAGAGTGCTTCGAGAAGTTGTGGTGCTGGCTGTACCCTGTCGCCTTTATAATATCAAGGGACTGGATAAATCCTATATGGAATTCCACATCACCTAAGTGGATAGAGGGTTTCATAACTAAGGAGGAAGCAGAAGCTTCACTTCAAGGTACCATAGGACTTCAAGAACCCGGTACCTTTATATTACGCTTCCCCACCTCAAGAAGCTGGCCCCACCCCGATGCTGGTAGTTTGGTTGTGACTTATGTTGGCAATGACTACAAACTTCACCACAAGCTACTTTCTATGGATCGTGTTTATAGTTCTTATAGCTCTGGCGACAAAGGAATTGACGAGAAACCACTGCAAGATATGCTATTGGCAGAACCGGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCACTGA 2151 0.4105 MGTDAMGIDGYSLLKDLRLEIEAKEGTFSLCFWVYLTSSTTFPATVIQQVYSDISKSAPFLVINDNKRINLLPVLILHKEAPDTFNINSWTEVPHATVDLEFPVGKWVHVGCEVSPSHVQLQINGDIVGKRSLTYLLNSEPDSSNLKKITLANVGGDENSVQGYVHNFEVFPLVSSIMDHHLKDPPLKLSIDESSASEIEEENDGVWGIVGGKASCRRNFSLDVVLSDAFGQPVDKENEVFASLLYADTGAPVENTTDEEAPLLVSYDGIEFSSCERPSKLLMGRASFKLKISQLSSKCDNRLFILRFCVPKLGSYSFLEAYSRPVRCISRSRNTRLSTLVWKRSTSALNRLSLSQCSAKDAGPLEHQHSDHEAKANPLMKRFRLGQDKISVSVKADPNLVRPDEECNSHVFTSNQVENGFTTNLDGRPANFDEVYDCPSDSESIGERNSPPDSMASRRYEISDMTIFKYCLAGLADRSLMLKEIAPSASDKEISELAHHVSLYSGCSHHGNQILIAKRLIKDGINLWKLMSPNNQHIPWQNAVYEIEDQFLKIASSRSRSLSIQDLELLRRISGCQEYLTQECFEKLWCWLYPVAFIISRDWINPIWNSTSPKWIEGFITKEEAEASLQGTIGLQEPGTFILRFPTSRSWPHPDAGSLVVTYVGNDYKLHHKLLSMDRVYSSYSSGDKGIDEKPLQDMLLAEPELSRLGRIIRSH* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1332 716 Pfam Concanavalin A-like lectin/glucanases superfamily 24 172 - -
Lan8g1332 716 PANTHER SIGNAL TRANSDUCER AND TRANSCRIPTION ACTIVATOR 8 713 - -
Lan8g1332 716 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 8 713 IPR001217 GO:0003700|GO:0006355|GO:0007165
Lan8g1332 716 Gene3D SH2 domain 601 712 IPR036860 -
Lan8g1332 716 Gene3D - 6 176 - -
Lan8g1332 716 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 172 IPR013320 -
Lan8g1332 716 ProSiteProfiles Src homology 2 (SH2) domain profile. 615 716 IPR000980 -
Lan8g1332 716 SUPERFAMILY SH2 domain 609 677 IPR036860 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Lan8g1332 Laminin_G_3 7e-08 CL0004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1332 8 20177310 20184904 Lan8g1332 8 20177310 20184904 ECH