Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan8g1308 | ATGGTTTTCATTGAGAATCATAGCCAATTTATTCATAGTTTGTATGCAATTGTTACCAAGGGTCATTGGAACAATCTCCTAAAAGTGAAGAATGGTTCTGCATTCACTTCCACCACAATTCACCATATAATTTTGTACCTCTCACACTATGGTTATGGACCCACCCATTCATTGGCATTCTTCAAATGGGTTGAGTCCACCCCAAATTACAAACACTCCTTGCAATGTTCATGGGCCATGATTCATTTGCTCACAAAACACAAGCACTTCAAAACTGCACAGCACATGCTTGACAAAATTGCCCACAGGGATTTTCTGTCATCACCTTCTGTTTTGAGCAGTTTGGTGAGGGGATATGATGACCCAGAAGTTAATGCACAGGTTTTGAGTTGGCTTGTGATACATTATGCAAAGTTGAGGATGACCCTTGATGCAATTCAGGTTTTTGAGCAAATGGGGTTGTTTAATGTGAGGCCTCATTTGCATGCTTGTACTGTGCTTTTGAATTGTTTGACAAAGGACGGGGTTACTAATATGGTGTGGAAGGTTCACAAGAGAATGGTTCAACTTGGGATTGTTGAGAATATTCATATTTATAATTGTTTAATTCATGCTTGTTCTAAATCAGGAGATGTGGAGAGGGTGGAAAAATTGTTAAATGAGATGGAAGTGAAGGGTGTGGATCCTGATATTTTCACATACAATACCTTGATATCATTGTATTGCAAGAAAGGTATGCATTATGAGGCATTGTCCATCCAGGATAAGATGGAAAGTGGAGGAATTAGTCTTGATATTGTTAGTTACAATTCTCTTATTCATGGATTTTGCAAAGAGGGTAGGATGAGAGAAGCATTGAGGATGTTTAGAGATATCAAAAGTGCAACTCCAAATCATGTGACATATACTACGCTGATTGACGGATATTGTAAAACGAATGAACTTGAGCAAGCTCTGAAATTGCGTGAGGTGATGGAAGCTAAGGGATTGGACCCTGGAGTTGTTACTTATAATTCAATTTTGCGCAAGCTTTGTCAAGATGGAAGGATAAGGGATGCAAACAAACTCTTGAATGAGATGAGTGAAAGAAAAGTTCAAGCTGACAACGTCACATGTAACACATTGATTAATGCTTACTGCAAGATAGGAGATCTTGAATCTGCCTTTAAATTTAAAGAAAAGATGTTAGACGCTGGACTAAAGCCTGACCCGTTTACATACAAGGCATTGATTCATGGGTTATGCAAGATGCATGATCTGGAAAAGGCCAAGGAGTTATTGTTTAGCATGCTTGGTGCTGGGTTTTCCCCCAGTTACTGCACATACTCATGGATTGTAGATGGCTACTGCAAGAAAGATAATGTAGATGCAATTTTAACAATGCCAGATGATTTTCTGAGTAGAGGTCTTTGTCTCGACGTTTCAATATACAGGGCATTGATAAGAAGGTTGTGCAAGATAGAAAGGATTGAATGTGCTGAAAACTTATTCAATCAAATGGAAGGGAAGGGAATATCACCTGACAGTATTATCTATACCAGTCTTGCTTATGTTTATTTTAAAGCAGGAAAGTCGAGGGCTGCCTCAAATATGTTAGAAGAGATGGCTAGAAGGAGGTTGATGATAACAGCCAAAATCTATAGATGTTTTAGTGATGTTGATGATAGTGGAAACAAAGTGTCACAGATCTTCTGGGATCATGTGGTAGAGAGGGGTCTGATGTCGAGAAATACAATGAACAAAATACGGCAGATGGCAACGTGA | 1764 | 0.3883 | MVFIENHSQFIHSLYAIVTKGHWNNLLKVKNGSAFTSTTIHHIILYLSHYGYGPTHSLAFFKWVESTPNYKHSLQCSWAMIHLLTKHKHFKTAQHMLDKIAHRDFLSSPSVLSSLVRGYDDPEVNAQVLSWLVIHYAKLRMTLDAIQVFEQMGLFNVRPHLHACTVLLNCLTKDGVTNMVWKVHKRMVQLGIVENIHIYNCLIHACSKSGDVERVEKLLNEMEVKGVDPDIFTYNTLISLYCKKGMHYEALSIQDKMESGGISLDIVSYNSLIHGFCKEGRMREALRMFRDIKSATPNHVTYTTLIDGYCKTNELEQALKLREVMEAKGLDPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKVQADNVTCNTLINAYCKIGDLESAFKFKEKMLDAGLKPDPFTYKALIHGLCKMHDLEKAKELLFSMLGAGFSPSYCTYSWIVDGYCKKDNVDAILTMPDDFLSRGLCLDVSIYRALIRRLCKIERIECAENLFNQMEGKGISPDSIIYTSLAYVYFKAGKSRAASNMLEEMARRRLMITAKIYRCFSDVDDSGNKVSQIFWDHVVERGLMSRNTMNKIRQMAT* | 588 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 508 | 542 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 298 | 332 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 232 | 265 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 198 | 231 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 300 | 332 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 370 | 403 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 405 | 438 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 267 | 294 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 335 | 368 | IPR002885 | - | |
| Lan8g1308 | 587 | TIGRFAM | PPR: pentatricopeptide repeat domain | 476 | 509 | IPR002885 | - | |
| Lan8g1308 | 587 | Pfam | Pentacotripeptide-repeat region of PRORP | 143 | 282 | IPR033443 | - | |
| Lan8g1308 | 587 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN | 6 | 583 | - | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 195 | 229 | IPR002885 | - | |
| Lan8g1308 | 587 | SUPERFAMILY | HCP-like | 233 | 442 | - | - | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 464 | 586 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 6 | 583 | - | - | |
| Lan8g1308 | 587 | Coils | Coil | 350 | 370 | - | - | |
| Lan8g1308 | 587 | Pfam | PPR repeat family | 368 | 416 | IPR002885 | - | |
| Lan8g1308 | 587 | Pfam | PPR repeat family | 473 | 515 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 333 | 367 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 230 | 264 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 403 | 437 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 473 | 507 | IPR002885 | - | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 265 | 295 | IPR002885 | - | |
| Lan8g1308 | 587 | Pfam | PPR repeat | 328 | 361 | IPR002885 | - | |
| Lan8g1308 | 587 | Pfam | PPR repeat | 296 | 326 | IPR002885 | - | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 257 | 324 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 188 | 256 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 325 | 395 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 52 | 187 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | Gene3D | Tetratricopeptide repeat domain | 396 | 463 | IPR011990 | GO:0005515 | |
| Lan8g1308 | 587 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 368 | 402 | IPR002885 | - |