Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1293 ATGTTTCAACTTAGAGATCCTTCAATTAAGCTTTTTGGAACAGATATTCATACTCATACTCATATTCCACTTGAAGACTCTCACACTCAGATTCATCCTCTGCCTCAACACATCAATATTATCATGAATGGATATGAAGAGCCATCAAAAGCTGAAATGAATGTGCCTTTGAAGAAAGTATCCGGCAAACACACCGATCCTCTAGAATATGCAAAAGATATTCCAAATACTCATGAAAGTCCTACTCCGGAACTGGTGTCCAAATTAGTTCATAGAACTAATGAAGGCAAGGCTGCTAAACGATATATTGACGAAAAAGAAAAGGTTTTAAAGAAGCCAGACAAGGTCCTGCCATGTCCACGCTGCAATAGTTCGGAAACAAAGTTTTGCTATTTCAACAATTACAATGTTAACCAACCTAGGCATTTCTGCAAGAATTGCCAGAGGTATTGGACAGCAGGGGGGACAATAAGAAATGTTCCCGTTGGGGCCGGAAAGCGCAAAAATAAGCCCTCAGATTTGCAGTATTGTCAAGAACCTGTAGCTCTTGATGCAGTATCTAGCATCCAGACAGATACCAACCTTGCTAGTAATGCACATTTATCATCGAGGCCTTTTAATGAAATGCGGAATATCCATGGTCCCGGGGAGGATGCTCCTCTCAGTGAATCCTTCCAAACTGTGTTAAATCTCGAAGGCCAGAAAAAAGCTGAAGTGGATACTTCTACTCTCAAAGATGATGGTGAGGAGCCTTCTAGCTCTTCGATAAGATCTGCTGAATCCTGTGAGAAGCATTATTCAGAAAGTGAAGTAGAACAAGTAGGCTTGACACAACAATGTAATGTTGTAACCCCTTTACATCCACTTCATTATTATCCTGCACCTCCATGGCCTCACCAATGGAATCCGTGTTGGAATGCTGTGACTTTTAGGCCGAGCAGTGTAACTTCTAGTCCTGCTTATATGGGTTCAGCAACCATGATGACAGTTCCAGGCTTCTCCATACCAACCGTAGAACTACCGGTAGCTCCCTCTTTGTATTGGTTGGTGGAAGAGTCTTCATTGGTTGGTGGATCCACAATTAGTGGCATCCCATCACCTTCATCTTCAGTTAGCAATAGTGGTTGTTCCGGCAATAGGTCTCCAACCTTAGGAAAACATTATAGAGATGGAAGTACACCAGGAGATGATACAATGAAACATAATCTTTGGGTACCTAAGACTGTAAGGATCAGTGATGCAAATGAGGCTGCAAAGAGTTCTATATGGTCAACTTTGGTTACAAAGTGTGAAAACTCCCAACAGAACAAGCCTATTATAAAAGGAAGTGTTTTTAAATCATTTGAACCTAAGTCGAATGTCGATTCACATATTTTAGATGATAATCAAATTCTAAAGGCAAACCCTGCTGCTTTCTCTCGCTCCGAATCTTTTCAGGAAAGCATATGA 1449 0.4106 MFQLRDPSIKLFGTDIHTHTHIPLEDSHTQIHPLPQHINIIMNGYEEPSKAEMNVPLKKVSGKHTDPLEYAKDIPNTHESPTPELVSKLVHRTNEGKAAKRYIDEKEKVLKKPDKVLPCPRCNSSETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPVGAGKRKNKPSDLQYCQEPVALDAVSSIQTDTNLASNAHLSSRPFNEMRNIHGPGEDAPLSESFQTVLNLEGQKKAEVDTSTLKDDGEEPSSSSIRSAESCEKHYSESEVEQVGLTQQCNVVTPLHPLHYYPAPPWPHQWNPCWNAVTFRPSSVTSSPAYMGSATMMTVPGFSIPTVELPVAPSLYWLVEESSLVGGSTISGIPSPSSSVSNSGCSGNRSPTLGKHYRDGSTPGDDTMKHNLWVPKTVRISDANEAAKSSIWSTLVTKCENSQQNKPIIKGSVFKSFEPKSNVDSHILDDNQILKANPAAFSRSESFQESI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1293 482 ProSiteProfiles Zinc finger Dof-type profile. 117 171 IPR003851 GO:0003677|GO:0006355
Lan8g1293 482 MobiDBLite consensus disorder prediction 199 221 - -
Lan8g1293 482 Pfam Dof domain, zinc finger 114 170 IPR003851 GO:0003677|GO:0006355
Lan8g1293 482 ProSitePatterns Zinc finger Dof-type signature. 119 155 IPR003851 GO:0003677|GO:0006355
Lan8g1293 482 MobiDBLite consensus disorder prediction 235 264 - -
Lan8g1293 482 MobiDBLite consensus disorder prediction 364 381 - -
Lan8g1293 482 MobiDBLite consensus disorder prediction 238 253 - -
Lan8g1293 482 PANTHER CYCLIC DOF FACTOR 2 9 482 IPR045174 GO:0003700|GO:0006355
Lan8g1293 482 MobiDBLite consensus disorder prediction 364 385 - -
Lan8g1293 482 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 9 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1293 Lan-Chr8 19442346 19444925 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1293 86 481 C2C2-Dof Transcription Factor Family AT5G39660 37.647 2.73e-59 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan8g1293 zf-Dof 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1293 - - gmx:102666857 511.531