Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1290 ATGGCCGGAAACTGTTTACCGGCGGTTCAGGTAACCGGAAGCGGCCGTCCTGTTCTTCTCCCGAACGAGATCGAGTGCTTCTTCCTCTCCTCCGTTGACGTTCTCTGCGAAGACACCGAACCCAACGCCACTTCCTTCCCTCATCTCAAATCCGGCGTTCTCATCCTCACCACCCACCGCCTCCTCTGGCTCTCCGATTCCCCCTCCGCCGTCGCATTCGCAATCCCCCTCGCCGCGATCTCCCACATCTTCTCCCATAAAAAGTCCCTCAAGTCAATGTTCACTTCCCCGAGGGTCCGCTTCCAGGTGTCGCTGTCGCCGGAAGGTAGGATTTCGGCGTCGGGTTCGAGCTCGGTGGTGGTGACGATCGTGGTGAAAGGGAAATGGGACTATGACGCGTTTTTGGCTAAGTTTTGGGGAAATTGGCGGGGTAGGGCGTGGGAAGAAGCGGAGAGTGTTTCGAGTTCGGGTTCAAATGTTGCGGCCGCGGCGTCTTCGAGTGGGATTTATTCAAGTGATGGGACGGTGAGGATGGTGGGAGTGTCAGGGATATTGAGGAAGGAACAGGAGATGTGGGAGAGTACTGATAAGAGCTTGAATGAGGCTTTTCAGGATTTGAATGCTCTTATGAGTAAGGCAAAAGAGATGGTGATGCTAGCAGAGAAAATGAGGCAAAAACTTTTGTCTGGCTCAAGTTCTCAATCTACTACAACTGGTGACGAGGAGATAGGTTCAAAGGAAGAGATGCAAGAATTGTTATTGAGTGTAGGTATAATATCCCCTGTCACCAAAGAGTCTGCAGGTGCCTTGTATCATCAACAGTTATCTCGTCAGTTGGCAGATTTTGTCAAAGTTCCACTTGAGAGAGCTGGAGGAATTATCAATCTAATTGATGTTTATTGTCTATTCAATCGTGCTCGCGGCACAGAATTGATTTCACCTGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTTTCATTGGTTCTGCGTAAGTTCGACAGTGGAGTCATGGTAATACAGACCAAGTCCCACAGTGATGAAGAGGTTATCACTAAAATCAAGATACTTGTTATGAAACCTGATGCTCTTCGACATGGGATAAGTGCTAGTGATGCTGCAAGGACACTGGGAGTTGCCCCGGCAATGGCAAAGGAGCATCTCTTGTCTGCTGAGAGCAAGGGTGTACTATGCAGAGATATAAGCCCTGATGGATTTCGATTCTATATTAACTTGTTCCTTGAATTTGATCGAGATGATATGTATTTAGTGAAAGATCAAGGTCTTTATGCCTCATGGGTAAGGGCAAACCATGCTCATGGGTAG 1335 0.4839 MAGNCLPAVQVTGSGRPVLLPNEIECFFLSSVDVLCEDTEPNATSFPHLKSGVLILTTHRLLWLSDSPSAVAFAIPLAAISHIFSHKKSLKSMFTSPRVRFQVSLSPEGRISASGSSSVVVTIVVKGKWDYDAFLAKFWGNWRGRAWEEAESVSSSGSNVAAAASSSGIYSSDGTVRMVGVSGILRKEQEMWESTDKSLNEAFQDLNALMSKAKEMVMLAEKMRQKLLSGSSSQSTTTGDEEIGSKEEMQELLLSVGIISPVTKESAGALYHQQLSRQLADFVKVPLERAGGIINLIDVYCLFNRARGTELISPDDLLQACSLWEKFDVSLVLRKFDSGVMVIQTKSHSDEEVITKIKILVMKPDALRHGISASDAARTLGVAPAMAKEHLLSAESKGVLCRDISPDGFRFYINLFLEFDRDDMYLVKDQGLYASWVRANHAHG* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1290 444 SUPERFAMILY PH domain-like 5 123 - -
Lan8g1290 444 ProSiteProfiles GLUE domain profile. 9 117 IPR021648 GO:0032266|GO:0043130
Lan8g1290 444 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 7 423 IPR037855 GO:0000814|GO:0032509|GO:0043130
Lan8g1290 444 Gene3D - 12 154 IPR011993 -
Lan8g1290 444 Gene3D - 347 418 IPR036388 -
Lan8g1290 444 Gene3D - 270 346 IPR036388 -
Lan8g1290 444 Gene3D - 194 268 - -
Lan8g1290 444 Pfam Vacuolar protein sorting protein 36 Vps36 11 103 IPR021648 GO:0032266|GO:0043130
Lan8g1290 444 Pfam EAP30/Vps36 family 179 403 IPR040608 -
Lan8g1290 444 SUPERFAMILY "Winged helix" DNA-binding domain 307 419 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1290 Lan-Chr8 19411130 19414997 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0737 7 6309708 6314756 Lan8g1290 8 19411130 19414997 LSH