Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1286 ATGGATGTCGAAGCAGTAGATGAAGGGGGAAACAGTGATAGAACTGTTTCTGAAAATGTTTCAGATGAAAAAGGCCAGAGACAAATTATGATTGTAAACTTGGCTGAAAGCCAAGTAAATAATCAGGATGGTGATGCATATAAGAAACCACAACTAGGCATGCTGTTTGAATCTGAGGATGCTGCAAAAATATTTTATGATGCATATGCAAGGCATGTAGGATTTAGCATCCATGTTGGTCAATTCAGTCGTGCTAAGCCTGATGGTAAAATTATAAGTTGGGACTTTGCTTGTTCCAGAGAGGTATTGAAAAGGAAGAATGTAGTGAGTTGCAGCGCAATGCTTAGGATAGAGAAAAAAGATGCAAACTGGATAGTGACAAAGTTTGTTGAGGACCATAATCATTCATTGGCTTCCACAAGTAAGGTGCACCACCTTCGACCCCGTAGGCATTTTGCAGGTGCTGCAAGGAATGTAATGGATACATCTGATGCTAGTAATGGTATCTATGCTTCCATGGATGACATTCCTTTAGAACCGATTGGTAATATCAGAAGTTCCTTTCCAGTAGAAAAATGTCACCCAACCCGAAACATCGGGCCTTTTGCCTGCGAAGGATATTCTCGAAAGAGGACTCTTGGAAGAGATGCTCACAATCTTCTGAATTATTTTAAGAAGATGCAAGCAGAAAACCCTGGCTTCTATTATGCAATACAGCTTGATGATGAGAACCGCATGACAAACGTATTCTGGGCTGATGCAAGGTCGAGAACAGCTTATTATTATTTTGGTGATGCAGTAACTTTTGACACGATGTATAGACCAAATCAATATCAAGTCCCATTTGCTCCCTTTACAGGAGTCAATCATCATGGTCAGATAGTTTTATTTGGTTGTGCATTACTTTTGGACGAATCTGAATCATCCTTTACTTGGCTGTTCAGGACATGGCTATCTGCTATGAATAATCGTCCGCCTGTTTCTATAACCACTGACCAAGATCGAGCCATACAAGCGGCTGTTACCCAGGTGTTTCCAGAAAGTCGCCACTGTATTTGTAAGTGGCACATTTTGAGAGAAGGTCAAGAACGTTTGGCTCATATTTACCTTGCTCATCCTTCATTCTATGGGGAACTATATAGCTGCATCAGTCACTCTGAGAGTATAGAAGATTTTGAATCTACATGGAAGTCTCTCATAGATAAATATGATCTCCAGAAAAATGATTGGCTTCAGGCAGTGTATAATGCTCGCAAACAATGGGCCCCTGTTTACTTTCATGGTACTTTTTTTGCTGCACTCACTCCAAGCCACGGGATTAGCTCCTTTTTTGAAGGCTATGTAAATCAACAGACAACCCTGCCTTTATTTTTTAAGCATTATGAAAGAGCTCTTGAGCATTCATTGGAAAAAGAATTAGAAGCAGATAACAATACCATTTGCACAACACCTGAATTGAAGACTCCATCACCAATGGAACATCAGGCTGCAAATTTGTACACTAAGAAGATTTTTACAAAGTTTCAGGAGGAACTGGTAGAAACTTTTGTGTATACTGCAAATAATGTTGAGGATGATGGCTTTGTCAGTAAATACAGGGTTGCAAAATATGAACACGACCACAAGGCGTACATGGTCACATTAGATATTTCTGAAATGAAGGCAAATTGTAGCTGTCAGATGTTTGAGTACTCGGGCATTCTTTGTCGACATATATTGACTGTCTACACTGTTACAAATGTTCTTACCCTTCCATCGCACTACATTTTGAAACGGTGGACAAGGAATGCAAAATCCAATTTTGTAACAGATGAAAGAACACCAAATCCGCTTGGCATTGAAAGTCTCACCTTGCGTTTTAATAGTCTATGTCGAGAAGCCATTAAGCTTGCAGAAGAAGGGGCAATAGCTGTTGAGACTTATAACACTGCAATGGATGCTTTAAGAGAGGTTAGTAAAAGGGTTGCAGTTGTTAAGAAAAATGTTGCAAAAGTCACACCCTCAAGCACTCAGGGTAACAGAGACAGTCAAGAAGATAACAGCAAGAAGAGCCTTTCATTAATTTCTGAAGTCATCCCATCATTATGGCCTTGGCAAGATTCAGTGACACAGCGCTTTAATCTCAATGACATTAGCTTTCCTGTTACTGATTTGAATCATCCTACCATGGCTCCGATTTCCATTCACCGGGATGGTGGTCCCGTAGATAACACAGTTGTCCTTAATAGTTTCAAGTCTATGACTTGGGTTATAGAAAATAAGAGTTCAAGCCCATTCAGTAAAGTTGCAGTGATCAACATGAAGCTGCAAGATTATGGCAAAAGTCCTTCAGGAGAGAGAAACGTACAATTCAGGGTGACGAGGGTCACTTTGGAGCCTATGTTGAAGTCTATGGTTCACATCAGTCAGCAGCTCGCTGTACCAGTCAATAGAGTTGCTGTTATCAATCTTAAGCTCCAGGATACAAAGACAAGTAGTGGGGAAACAGAGGTGAAATTCAATGTTTCTAAAGACACATTAGGTTCCATGCTGAGATCTATGAACTTCATCCAGGAGCAGCTATGA 2565 0.4031 MDVEAVDEGGNSDRTVSENVSDEKGQRQIMIVNLAESQVNNQDGDAYKKPQLGMLFESEDAAKIFYDAYARHVGFSIHVGQFSRAKPDGKIISWDFACSREVLKRKNVVSCSAMLRIEKKDANWIVTKFVEDHNHSLASTSKVHHLRPRRHFAGAARNVMDTSDASNGIYASMDDIPLEPIGNIRSSFPVEKCHPTRNIGPFACEGYSRKRTLGRDAHNLLNYFKKMQAENPGFYYAIQLDDENRMTNVFWADARSRTAYYYFGDAVTFDTMYRPNQYQVPFAPFTGVNHHGQIVLFGCALLLDESESSFTWLFRTWLSAMNNRPPVSITTDQDRAIQAAVTQVFPESRHCICKWHILREGQERLAHIYLAHPSFYGELYSCISHSESIEDFESTWKSLIDKYDLQKNDWLQAVYNARKQWAPVYFHGTFFAALTPSHGISSFFEGYVNQQTTLPLFFKHYERALEHSLEKELEADNNTICTTPELKTPSPMEHQAANLYTKKIFTKFQEELVETFVYTANNVEDDGFVSKYRVAKYEHDHKAYMVTLDISEMKANCSCQMFEYSGILCRHILTVYTVTNVLTLPSHYILKRWTRNAKSNFVTDERTPNPLGIESLTLRFNSLCREAIKLAEEGAIAVETYNTAMDALREVSKRVAVVKKNVAKVTPSSTQGNRDSQEDNSKKSLSLISEVIPSLWPWQDSVTQRFNLNDISFPVTDLNHPTMAPISIHRDGGPVDNTVVLNSFKSMTWVIENKSSSPFSKVAVINMKLQDYGKSPSGERNVQFRVTRVTLEPMLKSMVHISQQLAVPVNRVAVINLKLQDTKTSSGETEVKFNVSKDTLGSMLRSMNFIQEQL* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1286 854 MobiDBLite consensus disorder prediction 1 24 - -
Lan8g1286 854 SMART 26again6 555 582 IPR006564 GO:0008270
Lan8g1286 854 Pfam SWIM zinc finger 546 577 IPR007527 GO:0008270
Lan8g1286 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 36 799 - -
Lan8g1286 854 MobiDBLite consensus disorder prediction 7 21 - -
Lan8g1286 854 Pfam FAR1 DNA-binding domain 65 138 IPR004330 -
Lan8g1286 854 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 799 IPR031052 GO:0006355
Lan8g1286 854 ProSiteProfiles Zinc finger SWIM-type profile. 544 580 IPR007527 GO:0008270
Lan8g1286 854 Pfam MULE transposase domain 267 359 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1286 Lan-Chr8 19362680 19367802 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan8g1286 MULE 3.9e-28 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0734 7 6270947 6276450 Lan8g1286 8 19362680 19367802 LSH