Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1285 ATGTACTGCCATATCTTTTTCAATAAACTTCACACACTTTCCCTCACTTCACTTTCTCAATTTCTGAACCACCAATTAGGGTTTATTCTTCTTTCAATTTCAATGGCGGAAGTTATCAATTTCCCCACCGATTCCTCTCTTCACAAATCCAAATCGCAATCCCCTCCTCCTTCTCCTTCCTCCGCCCCCGATCACCACCACCTCCCTCCGCCTCCACCTCCACGGAGGCGTGACAGGAGGGACGACAGGGACTTCGATCGCCATCCTAATCGCCGTCCACCTCCACCGGATTACTATGATCACCGCACGCCCCCTCCGCCGGTACATCCCAGAGACAGAGATAGGGACTTCAAGCGCCGACGCAGCCTTAGCCCTTCTAACCGCGGTCGACGTTATTCTCCAGCGTCGAGGCGCTCCCCTCCGCCGTATAAGCGCTCCAGAAGAGATAGTCCTCGCGGTGGTGGTTATGGACATGATGACAGCAGATTTGGATATGATCGTTATGGTGGCTATGAACGGGGAGTTGGTGGAAGAGGTGGTTATGTAGATGAGAGGTCGTATGGAAGGTTTGGACGTCGTTCTGGAGGGGGATATCAAAATGGGATTCCTGATTTGGAATCCAATCGTGGTTATGCAGACATGCCTGGTGGTGGTGCACAAAGAGAGGGATTGATGTCTTACAAGCAATTCATTCAGGAGCTTGAGGATGACATACTACCAGCTGAAGCAGAACGCAGGTATCAAGAATACAAATCAGAGTACATTTCCACCCAAAAACGAGCTTATTTTAATGCTCACAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAACTTACTTACAGTCATCGAAAGGAGGAATGAAAATGCTCGACAGCTGGCAAAGGATTTTTTGCTTGATTTGCAGAGTGGAACGTTAGACCTAAATCCTGGTTTAAATGCCTCTAAGTCCAGCAAATCAGGGCAAGCTAGTGAGCCAAATTCAGAGGAGGAAGCAGAGACTGGGGGTAAACGAAGAAGGCATGGTAGGGGATCTAATAAAGATAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATCAGTTCTGAACCTAGACGTATACAAACAGACATTCAACAGGCTCAGGCCCTTGTTCGTAAGCTTGACAAAGAAAAGGGGATTGAAGATAATGTTTTATGCAGCAGTAATCACAATAAAAATGGTGATAAGGCTCACAGTGGATCTGTTTGTCCAATAGTAATTATACGGGGCCAAACATCTGTTAAAGGTCTGGAGGGTGTTGAGCTTCTGGACATACTTATTACATATCTTTGGCAGATTCATGGTGTAGATTATTATGGTATGATTGAGACTCATGAGGCCAAGGGTTTAAGGCATGTGAGGTCAGAAGGAATAGTTCATGAAGAAACAGATAAATCAAGTGCTGAATGGGAGAAGAAACTTGACCTATTTTGGCAGGGGAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGGTAAGGAGAAGATAGAGGCTGCAGCAGCTGAAGTATTGGATCCATATGTAAGAAAAATCAGGGATGAGAAGTATGGGTGGAAGTATGGTTGTGGAGCTAAGGGTTGCACAAAGCTTTTCCATGCATCTGAATTTGTGCACAAACATCTTAAGCTAAAACACCCAGAGCTTGTAGTGGAACAAACTTCAAAAGTGTGTGAGGATCTATATTTTCAAAATTACATGAATGATCCCGATGCTCCTGGTGGAAATCCTGTCATGCAACAACCTCAGAAGGACAAGCCTTTAAGGGGAAGATTAGGTCTTGAGGGTCGATTGAGAGATGATCGTGGTCTCGAGGGTCGGTTGAGAGATGATCGTGGTAATCGGCGAGACTATGATCAGAATGACAGAATAAATGGAGATAGGCATGATAGTTCTCCATCCCGTGATCAGCAGTCTAAGGCACTTGAGATCGGAGACCATGATGAAACAATGTATGATTCATATGGAGGGCCTGGTGTACCTCCTTTTGCCTCGGATATGCCCCCTCCTCCACAAGTGTTGATGCCTCTACCTGGTGCCGGGCCTTTGGGACCCTTTATTCCTGCTCCGCCAGAAGTTGCAATGCAGATGCTGAGAGAGCAAGGAGGACCATCTTCATATGATAACCCTGTAAGAAAGATGCGGTCTGGCCCTCATATGGGTGGACCGGCTCCAATAGTTGCTGTTCCTCCAGGTTTTAGACCTGATCCTCGACAGATGCGAAGTTATCAAGATCTGGATGCCCCAGATGACGAGGTCACTGTCATAGACTATCGGAGTTTATAG 2313 0.4639 MYCHIFFNKLHTLSLTSLSQFLNHQLGFILLSISMAEVINFPTDSSLHKSKSQSPPPSPSSAPDHHHLPPPPPPRRRDRRDDRDFDRHPNRRPPPPDYYDHRTPPPPVHPRDRDRDFKRRRSLSPSNRGRRYSPASRRSPPPYKRSRRDSPRGGGYGHDDSRFGYDRYGGYERGVGGRGGYVDERSYGRFGRRSGGGYQNGIPDLESNRGYADMPGGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENARQLAKDFLLDLQSGTLDLNPGLNASKSSKSGQASEPNSEEEAETGGKRRRHGRGSNKDNDFSAAPKAHPISSEPRRIQTDIQQAQALVRKLDKEKGIEDNVLCSSNHNKNGDKAHSGSVCPIVIIRGQTSVKGLEGVELLDILITYLWQIHGVDYYGMIETHEAKGLRHVRSEGIVHEETDKSSAEWEKKLDLFWQGRLNGQDPLEVMTGKEKIEAAAAEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHASEFVHKHLKLKHPELVVEQTSKVCEDLYFQNYMNDPDAPGGNPVMQQPQKDKPLRGRLGLEGRLRDDRGLEGRLRDDRGNRRDYDQNDRINGDRHDSSPSRDQQSKALEIGDHDETMYDSYGGPGVPPFASDMPPPPQVLMPLPGAGPLGPFIPAPPEVAMQMLREQGGPSSYDNPVRKMRSGPHMGGPAPIVAVPPGFRPDPRQMRSYQDLDAPDDEVTVIDYRSL* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1285 770 MobiDBLite consensus disorder prediction 142 167 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 332 349 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 577 648 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 69 123 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 597 648 - -
Lan8g1285 770 PANTHER ARSENITE-RESISTANCE PROTEIN 2 35 612 IPR039727 GO:0006397
Lan8g1285 770 PANTHER ARSENITE-RESISTANCE PROTEIN 2 611 770 IPR039727 GO:0006397
Lan8g1285 770 Pfam SERRATE/Ars2, N-terminal domain 228 311 IPR021933 -
Lan8g1285 770 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 611 770 - -
Lan8g1285 770 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 35 612 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 311 369 - -
Lan8g1285 770 Pfam Arsenite-resistance protein 2 471 611 IPR007042 -
Lan8g1285 770 MobiDBLite consensus disorder prediction 45 203 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 311 331 - -
Lan8g1285 770 MobiDBLite consensus disorder prediction 710 758 - -
Lan8g1285 770 ProSitePatterns Zinc finger C2H2 type domain signature. 532 555 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1285 Lan-Chr8 19352524 19378115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1285 92 770 C2H2 Transcription Factor Family AT2G27100 61.693 0.0 724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0733 7 6260782 6270526 Lan8g1285 8 19352524 19378115 LSH