Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1283 ATGAAACATGATGAAACTAGAAGACTCTCAGATGAATATGAGGTTTCAAACATTCTAGGAAGAGGTGGATTTTCTGTTGTGAGAAAAGGTACAAAGAAATCAAGTAGTGAGAAAATCCATGTAGCCATCAAAACACTTAGGAGGGTAGGTACTTCAAGCAACCCTTTTGGAACACCAAGAACAAAAGTTGGTGGTGGTGATGGAGGAGGAGAAAAGAGCATAGCAGCATCTATAATGGGGTTCACAACATTGAGACAAGTCTCAGTCTCAGATGCATTACTCACCAATGAGATCTTAGTAATGAGGAAGATAGTAGAAAATGTTTCACCACATCCAAATGTTATTGACCTCTATGATGTATATGAGGACTCAAATGGTGTTCACCTTGTGCTGGAGCTGTGTTCTGGTGGAGAACTGTTTGATAGGATTGTGGCACAAGATAGGTACTCCGAGACCGAGGCCGCGGCCGTGGTTCGACAAATTGCAGCAGGGCTAGAGGCTATTCATAAAGTTAACATTATCCATAGGGACTTGAAGCCAGAAAATTGCCTTTTCTTGGATGTTAGGAAGGATTCTCCACTAAAGATCATGGACTTTGGGTTGAGTTCTGTGGAAGAGTTTACTGACCCTGTTGTTGGTTTGTTTGGATCTATTGATTATGTTTCACCTGAGGCTCTTTCTCAAGGAAAGATAACTACCAAAAGTGATATGTGGTCTTTGGGAGTTATTTTATATATCTTGCTCTCTGGGTATCCTCCTTTCATTGCTCAGACTAATCGCCAAAAACAACAAATGATAATGAATGGGAATTTCAGTTTCTATGAGAAGACATGGAAGGGCATAACTCAAGCAGCCAAGCAATTGATTTCAAGTCTTCTCAGTGTTGATCCTAGTAGGAGACCCAGTGCTCAAGAGCTTCTGAATCATCCATGGGTTAGAGGTGACATAGCCAAAGATGATCAAATGGACCCTGAGATAGTCTCAAGGTTGCAGACCTTTAATGCTCGGCGCAAACTCCGTGTAGCCGCAATTGCTAGTGTTTGGAGCACCACAATGTTCTTGAGAACCAAAAAACTGAAATCATTGATAGGATCCTATGACCTCAAAGAAGAAGAAATTGAAAACCTCAGGATACATTTCAAGAAGATATGTGCAAATGGAGACAATGCCACTCTCTCTGAGTTTGAGGAGGTGCTGAAGGCAATGAATATGGCATCTCTGATCCCTCTAGCACCACGTATATTTGACTTGTTTGACAACAACCGCGACGGAACAGTTGACATGCGTGAGATACTATGTGGATTCTCCAGCCTCAAAAATTCAAAAGGAGATGATGCTCTTCGTTTGTGCTTCCAGATGTATGACACGGATCGATCCGGGTGCATCACAAAGGAAGAAGTAGCATCCATGCTCAGAGCTTTGCCAGAGCACTTTCTTCCAGCTGATATAACTGAACCTGGAAAATTGGATGAGATATTTGACAGAATGGATGCTAACAGTGATGGAAAAGTTACCTTTGATGAATTCAAAGCTGCTATGCTCAGAGATAGTTCTCTTCAAGATGTAGTCCTCTCTTCACTTCGCCCACTATAG 1593 0.4187 MKHDETRRLSDEYEVSNILGRGGFSVVRKGTKKSSSEKIHVAIKTLRRVGTSSNPFGTPRTKVGGGDGGGEKSIAASIMGFTTLRQVSVSDALLTNEILVMRKIVENVSPHPNVIDLYDVYEDSNGVHLVLELCSGGELFDRIVAQDRYSETEAAAVVRQIAAGLEAIHKVNIIHRDLKPENCLFLDVRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITTKSDMWSLGVILYILLSGYPPFIAQTNRQKQQMIMNGNFSFYEKTWKGITQAAKQLISSLLSVDPSRRPSAQELLNHPWVRGDIAKDDQMDPEIVSRLQTFNARRKLRVAAIASVWSTTMFLRTKKLKSLIGSYDLKEEEIENLRIHFKKICANGDNATLSEFEEVLKAMNMASLIPLAPRIFDLFDNNRDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLRALPEHFLPADITEPGKLDEIFDRMDANSDGKVTFDEFKAAMLRDSSLQDVVLSSLRPL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1283 530 SMART serkin_6 13 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1283 530 Pfam EF hand 415 430 IPR002048 GO:0005509
Lan8g1283 530 Gene3D Phosphorylase Kinase; domain 1 1 63 - -
Lan8g1283 530 Gene3D Transferase(Phosphotransferase) domain 1 139 334 - -
Lan8g1283 530 PRINTS Recoverin family signature 368 387 - -
Lan8g1283 530 PRINTS Recoverin family signature 414 435 - -
Lan8g1283 530 PRINTS Recoverin family signature 438 457 - -
Lan8g1283 530 PRINTS Recoverin family signature 460 478 - -
Lan8g1283 530 SMART efh_1 446 474 IPR002048 GO:0005509
Lan8g1283 530 SMART efh_1 488 516 IPR002048 GO:0005509
Lan8g1283 530 SMART efh_1 410 438 IPR002048 GO:0005509
Lan8g1283 530 Gene3D Phosphorylase Kinase; domain 1 70 138 - -
Lan8g1283 530 CDD EFh 447 513 IPR002048 GO:0005509
Lan8g1283 530 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 513 - -
Lan8g1283 530 Pfam Protein kinase domain 102 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1283 530 SUPERFAMILY Protein kinase-like (PK-like) 5 336 IPR011009 -
Lan8g1283 530 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Lan8g1283 530 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Lan8g1283 530 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 4 513 - -
Lan8g1283 530 CDD STKc_CAMK 13 311 - -
Lan8g1283 530 ProSiteProfiles EF-hand calcium-binding domain profile. 484 519 IPR002048 GO:0005509
Lan8g1283 530 Pfam EF-hand domain pair 445 513 IPR002048 GO:0005509
Lan8g1283 530 ProSitePatterns EF-hand calcium-binding domain. 497 509 IPR018247 -
Lan8g1283 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lan8g1283 530 ProSitePatterns Protein kinases ATP-binding region signature. 19 44 IPR017441 GO:0005524
Lan8g1283 530 MobiDBLite consensus disorder prediction 50 69 - -
Lan8g1283 530 CDD EFh 413 472 IPR002048 GO:0005509
Lan8g1283 530 Gene3D - 335 524 - -
Lan8g1283 530 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Lan8g1283 530 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Lan8g1283 530 SUPERFAMILY EF-hand 356 520 IPR011992 -
Lan8g1283 530 ProSiteProfiles Protein kinase domain profile. 13 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1283 Lan-Chr8 19330338 19334589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1283 93 517 EF-hand Containing Proteins AT3G10660 37.529 8.74e-80 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Lan8g1283 Pkinase 9.8e-57 CL0016