Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1280 ATGTATAACAAGTGTAGATTAAAGATGAAACTCTTTGCTAACATTTTCTTTATGTTCTTTGTTGCCTTCACCAGCATCCAACATTGCTATGCAGACTGTGAAAACTTACAGGACACTTGTCCTACAGTTTCACCCAAAAAGCAGACCATATTCATCAATGGCCTACCCTGCAAAAATCCAGCTAATATAACAGCTCAAGATTTCAAGACTTCAGAATTAAGCAACCCTGGGTCTAAAGATATATTTGGTGCTTCACTCAAATTTGTCACTGCTTCTGAGTTTCCTGGTCTTAACACTCTTGGCCTCTCAATTGGAAGAACTGATATGGATGGTGATGGCCTGGTAAATTTCCATTATCACCCTAGAGCTACTGAGATTATATTTGTTACCAAAGGGGTATTGCTTGCTGGATTTGTTGATACCAAAAACCAAGTTTTTCAAGAGTTTCTTAATGTAGGTGATGTTTTTGTGTTCCCAAAGGGTTTGTTTCACTTCATTCTAAATAATGGGTTTCAAGATGCCACTGCAATTTCAGTGTTCAACAGCCAAAACCCAGGGCTTGTATCTATCACAGCAACAACTTTTGACAACACAGTGGAATCGTTAGAGAACCTAAAGAAGAGACTTGCCTCACTTTCTGAAGGTCATGATGTTGCTAATTTAACCATGCCAGGGTTAGAAAGCATTTTCAGTTAG 696 0.3851 MYNKCRLKMKLFANIFFMFFVAFTSIQHCYADCENLQDTCPTVSPKKQTIFINGLPCKNPANITAQDFKTSELSNPGSKDIFGASLKFVTASEFPGLNTLGLSIGRTDMDGDGLVNFHYHPRATEIIFVTKGVLLAGFVDTKNQVFQEFLNVGDVFVFPKGLFHFILNNGFQDATAISVFNSQNPGLVSITATTFDNTVESLENLKKRLASLSEGHDVANLTMPGLESIFS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1280 231 SMART Cupin_1_3 71 200 IPR006045 -
Lan8g1280 231 CDD cupin_OxOx 32 201 - -
Lan8g1280 231 Pfam Cupin 83 208 IPR006045 -
Lan8g1280 231 SUPERFAMILY RmlC-like cupins 42 193 IPR011051 -
Lan8g1280 231 ProSitePatterns Germin family signature. 113 126 IPR019780 GO:0030145
Lan8g1280 231 Gene3D Jelly Rolls 31 215 IPR014710 -
Lan8g1280 231 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 4 18 214 - -
Lan8g1280 231 PRINTS Germin signature 118 138 IPR001929 GO:0030145
Lan8g1280 231 PRINTS Germin signature 148 168 IPR001929 GO:0030145
Lan8g1280 231 PRINTS Germin signature 181 196 IPR001929 GO:0030145
Lan8g1280 231 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 18 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1280 Lan-Chr8 19306234 19307301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1280 34 201 Miscellaneous Gene Families AT1G72610 40.237 6.58e-36 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1280 8 19306234 19307301 Lan13g0668 13 5721084 5721928 LSH