Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1275 ATGGCCACCCTTATTGCTCCCAGCAACCACTCTCCCCATGAAGATGCTGAAACTCTCCAACATGCTTTCAAAGGATGGGGGACTGATGAGAAAACTGTGATAGTGATATTGGGTCACAGAAATGTTTATCAGAGGCAAGAAATCAGAAGAGCTTATGAAGAGATTTTCCAAGAAGATCTTGTCAAAAAGTTGGAGTCTGAACTCAAAGGAGACTTTGAGAGAGCTGTGTATCGTTGGATACATGAGCCTGAAGAACGTGATGCTGTTTTGCTTCATGTTGCACTGAAAAGTGGTAAAAACTACCATATCATAGTGGAGATTTCCTCTGTCCTCTCCCCGGAGGAGCTTTTGGCGGTGAGGCGTGCTTACCTTCACCGCTACAAGCGCTCCTTGGAGGAGGATGTTGCATCTCATACCTCTGGTCACCTCCGCCAGCTTTTGGTGGGGCTAGTGACCTCATATAGATACACTGGTGATGAGATCAATGTAAGATTGGCACAATCTGAAGCTGAAATTCTTCATGAATCTATCAAAGAGAAGAATGGAAATGAGGAAGAAGCTGTGAGGATCTTGAGTACAAGGAGCAAAATTCAGCTGATTGCAACTTTCAACTACTACAGAGAGATCCATGGCGCTTCTATCACTAAGAAGCTGTTGGATGAAGAATCTGATGATTTTCAGAAGGCATTGTACACTGCTATTCGTATCACCACTGATCATGTTAAGTACTATGAAAAGGTTCTTCGGCACGCGATCAAAGGAGTTGGAACGGATGAAGATGCGGTTACTCGCGTGATTGTGAGCAGGGCTGAGATTGACTTGGGGGTCATATCAGAGGCTTATTACAAGAGAAACAGTGTTCTTCTTGAGGATGCTGTGGCCAGTGATACCTCAGGGGACTTTAAACACTTCCTTCTCACTCTTTTGGGAAAGGATGATTAA 942 0.4427 MATLIAPSNHSPHEDAETLQHAFKGWGTDEKTVIVILGHRNVYQRQEIRRAYEEIFQEDLVKKLESELKGDFERAVYRWIHEPEERDAVLLHVALKSGKNYHIIVEISSVLSPEELLAVRRAYLHRYKRSLEEDVASHTSGHLRQLLVGLVTSYRYTGDEINVRLAQSEAEILHESIKEKNGNEEEAVRILSTRSKIQLIATFNYYREIHGASITKKLLDEESDDFQKALYTAIRITTDHVKYYEKVLRHAIKGVGTDEDAVTRVIVSRAEIDLGVISEAYYKRNSVLLEDAVASDTSGDFKHFLLTLLGKDD* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1275 313 Gene3D Annexin 241 311 IPR037104 GO:0005509|GO:0005544
Lan8g1275 313 ProSiteProfiles Annexin repeat profile. 82 152 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 PANTHER ANNEXIN 7 313 - -
Lan8g1275 313 ProSiteProfiles Annexin repeat profile. 239 310 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Plant annexin signature 117 131 IPR009118 -
Lan8g1275 313 PRINTS Plant annexin signature 159 179 IPR009118 -
Lan8g1275 313 PRINTS Plant annexin signature 224 242 IPR009118 -
Lan8g1275 313 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Lan8g1275 313 SMART annex3 181 233 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 SMART annex3 256 308 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 SUPERFAMILY Annexin 3 313 IPR037104 GO:0005509|GO:0005544
Lan8g1275 313 Pfam Annexin 246 308 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 Pfam Annexin 169 230 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 Pfam Annexin 87 150 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 Gene3D Annexin 163 238 IPR037104 GO:0005509|GO:0005544
Lan8g1275 313 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 Gene3D Annexin 82 151 IPR037104 GO:0005509|GO:0005544
Lan8g1275 313 ProSiteProfiles Annexin repeat profile. 164 235 IPR018502 GO:0005509|GO:0005544
Lan8g1275 313 ProSitePatterns Annexin repeat signature. 256 308 IPR018252 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Annexin family signature 172 198 IPR001464 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Annexin family signature 252 272 IPR001464 GO:0005509|GO:0005544
Lan8g1275 313 PRINTS Annexin family signature 296 309 IPR001464 GO:0005509|GO:0005544
Lan8g1275 313 PANTHER ANNEXIN 7 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1275 Lan-Chr8 19234166 19236138 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0766 7 6667777 6670257 Lan8g1275 8 19234166 19236138 LSH
Lan8g1275 8 19234166 19236138 Lan13g0703 13 6749219 6752997 LSH