Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1271 ATGGGTGCTGCTTGTTGTGTTGCAGCCAAAGATAAAACTGTACAAAGTGGATCTACCTATGATGTCTTACATCGGAACATTCGCTGTTCTCCGTCATGGAGTTTCCGGTGGGATCATCCAGCCCGTGTAGCTGGTGAAGATGCTCCTGTAACTTGGTTTTCTGATGGTATCCGCAGGAATGATGGATCGGAGAGCAAAAATGAATCATCATATGTATCAGAGGGTGGAAGCCCATTGGAGAGTGATCAAAGGAAACGATGCCAAAAGTACCCAATTTCTGAAGGAGGTGCTGGACTTGTAATAAATTCTACTTCAGATCAATCTATTTCTACGAATGTCTCCATGGATGTGAACGTGGAACAGGTGAAGGGGTTGGAAGAATCATCAACAGTGTCAGTGTCAGGTACATCTCCGACAAAGCCGCCATCATCATTACCTTCTACTTCGCTGTCGGCGTCTCCTCTGCCATCGCAAAGTCATCTTGCACCCTCCAGCTCAACCCCATCAAGGTCGCCCTACCAGTCCCCAGGACACCAACTATTATGGCAAGTTTCTAACAGCCGAGTCCCAGGATGCAAGTCACCAAGCAGCTTCTACGTGTCTGAAGAAAAGCCAGTATTTCCCTCATGGAACAATGAATTGGGTATGCACTCCCGTGATGGATCTTCAGATGGTTGGTCTGTGCCTGGCTTTTCTGAGCTGATGGGAACTTCTCGTAGAGAAAGATGGTCGTTTGATAGTGAATCATTTGGTTTTAACCCTGAAAGGTTACATAGATCAAGTAATCGGTTTTCAACATCTCCGGTTGATTTCCAAACATGTGGTGTTTGCTCAAAACTTTTAACTGAGAAGTCTTCTTGGAGCTCCCAAAAGATAATTGCAAGTAATGACCTTGCTGTAGTTTCTGTTCTTATTTGTGGCCATGTTTATCATGCTGAATGTTTGGAGAGTATGACACCTGAAATCAGCAAGTATGATCCAGCTTGTCCAGTTTGCACTTTTGGTGAGAAACAAACTCTTAAGTTGTTTGAAAAAGCTCTGAAAGCTGAAATGGATTTGAAGGCTGGAAACAAGAAATCAAAGAACCGAATTGTGGACAGTGAAATAGATGATTTTGTGTTTGATCGCGTTAAAGATGGAGGGTGTCAAGGTAAAGGTCCTAGGATGGATTCTAGTTCCAGTGGGAGAAGATTCTTTGGGAAGCCATTTCTGAAGAGACACTTCTCATTTGGCTCAAACAGTTCCAAATCCATGTTACATAATCACCCTACAAAAAAGAAGGGATTCTTTTGGGGGAAATCTAGCAAGCAATAA 1314 0.4346 MGAACCVAAKDKTVQSGSTYDVLHRNIRCSPSWSFRWDHPARVAGEDAPVTWFSDGIRRNDGSESKNESSYVSEGGSPLESDQRKRCQKYPISEGGAGLVINSTSDQSISTNVSMDVNVEQVKGLEESSTVSVSGTSPTKPPSSLPSTSLSASPLPSQSHLAPSSSTPSRSPYQSPGHQLLWQVSNSRVPGCKSPSSFYVSEEKPVFPSWNNELGMHSRDGSSDGWSVPGFSELMGTSRRERWSFDSESFGFNPERLHRSSNRFSTSPVDFQTCGVCSKLLTEKSSWSSQKIIASNDLAVVSVLICGHVYHAECLESMTPEISKYDPACPVCTFGEKQTLKLFEKALKAEMDLKAGNKKSKNRIVDSEIDDFVFDRVKDGGCQGKGPRMDSSSSGRRFFGKPFLKRHFSFGSNSSKSMLHNHPTKKKGFFWGKSSKQ* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1271 437 PANTHER EXPRESSED PROTEIN 1 432 - -
Lan8g1271 437 Coils Coil 436 437 - -
Lan8g1271 437 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 255 334 IPR013083 -
Lan8g1271 437 ProSiteProfiles Zinc finger RING-type profile. 274 333 IPR001841 -
Lan8g1271 437 PANTHER BNAA09G43140D PROTEIN 1 432 - -
Lan8g1271 437 MobiDBLite consensus disorder prediction 126 177 - -
Lan8g1271 437 SMART ring_2 274 332 IPR001841 -
Lan8g1271 437 SUPERFAMILY RING/U-box 273 333 - -
Lan8g1271 437 MobiDBLite consensus disorder prediction 55 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1271 Lan-Chr8 19177235 19185016 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0772 7 6790168 6795758 Lan8g1271 8 19177235 19185016 LSH
Lan8g1271 8 19177235 19185016 Lan13g0706 13 6769759 6775103 LSH