Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1270 ATGGGGAAGATAGAAAAAAAACAGAACTTTTCAGTGCCCTTTCTATCCTCCTTGTTATCTTTCAACATGGTTATCCTCCTGGCCATTTTGTTCTTGGCCTTTTTTTCTTCTCATGCATATTCAGCAGTTCCTGTTTCATCTTTCACTCCAAAGGATAACTTTCTCATTGATTGTGGTGCAGAGAATCCACCTACTCTCCCTGATGGAAGACTATTCAAATCAGACCCTCAAGCCAATTCTTTCTTACAAGCCAAAGATGACTATAAAGTTTCAGATGGTGATGATCCTAAGCTTCCTTCACCTATATATAAAACTGCAAGGATCTTCATTCAGGAAGCTAAATATTCCTTCCATTTGGTTCAGCCAGGATTTCATTGGATTCGGCTTCATTTTTATCCGGTAAAAAACAATGTCTTTGATCTTCATAAGGCCACTTTTTCTGTTAACACAAATGTGCATGTCCTTCTTCATAGTTTCAATGTTAATAACACTGATAAGCCAATCCTCAAGGAGTACCTCATCAATGCAAATGAATCACAATTCACATTGATCTTCAGTCCCTTAAAGAACTCGGCTGCATTCATCAATGCTATTGAGGTTGTTTCAGCTCCTGATAATCTGATATTTGACACTGGGGCTGCCCTTTTCCCGGTCGGCGAATTTTCTGGCCTAACAAGTTATGCTATCCAACCTGTTTACAGGCTCAACAATGGAGGACCCTTGATCACGTCATCAAATGATACCCTTGGAAGAATTTGGGAAAATGATGAGCCTTTCCTCACAAATAAGAATTTGGCGAAGAGTGTTTCGGTGGCTACCAATGCAATTAAGTTCCCTACTGATACACCAACAATTTCTCCTTTGGTTGCACCACAATCTGTGTATGCTTCTGCTACTGAGATGGGTGATGCTGGTGTTAATCAACCAAATTTCAATGTGTCATGGAAATTTGATGTGGATACTTCTTTTAGTTACCTTGTTAGGCTGCATTTCTGTGATATTGTCAGCAAAGGGCTTAATGAACTCTACTTTAATGTCTATGTTAATGGGAAAATGGCAATTTCAAATTTGGATTTATCGGCTACTACTGGCGCCTTATCGACACCATACTACAAAGACATTGTGGTGAATGTAACATTGATGACTGAGGGACTAACAGTTCAGGTTGGGCCAGCAAAGGCTGAAGGTGGAAATGCCAATGCTATTGTGAATGGAATAGAGGTTATGAAGTTGAGCAACTCAGTTGATAGTTTGGATGGAGAATTCGGTGTTGATGGAAGAAAGGCTGGTGGTTCTAACCGTGGGACGGTGGCGGCTGCTGGATTTGCCATGATGTTTGGAGCCTTTGTTGGTCTAGGTGCCATGGTGGTCAAGTGGCACAGGAGGCCTCAGGATTGGCAAAAGAGGAATAGCTTCTCTTCATGGTTACTTCCTCTACACGCCGGCGATACAAGCTTCGCTAGCAGCAAGAGCAACATGTACTCCTCAACTATGGGGTTAGGAAGGTATTTCTCCTTTGCAGAATTGCAGGAAGCAACCAAGAACTTTGATTCCAAGGCCATTATTGGTGTTGGTGGATTTGGAAATGTGTATTTGGGTGTGATTGATGAGGGAACTGAAGTGGCAGTGAAGAGAGGAAATCCACAATCAGAACAAGGTATAACAGAATTCCAGACAGAAATTCAAATGTTGTCCAAGCTTAGACATAGGCATTTGGTGTCCTTGATTGGATATTGTGACGAGAATGAAGAGATGATCCTGGTTTATGAGTACATGCCTAATGGACATTTCCGGGACCATCTTTATGGAAAGAACTTGCCTGTTCTTTCTTGGAAGCAAAGGTTAGAGGTCTGTATCGGATCGGCTCGAGGCCTTCACTACCTTCACACTGGTGCAGCACAAGGCATCATTCATCGTGATGTCAAGACTACAAACATTTTGCTTGATGAAAACTTCACAGCCAAGGTATCTGATTTTGGACTTTCAAAGGATGCACCTATGGGCCAGGGTCATGTTAGCACAGCAGTAAAAGGTAGCTTTGGTTATTTAGACCCTGAGTACTTCAGAAGGCAACAATTGACCGAAAAATCCGATGTGTACTCATTTGGCGTAGTCCTTCTCGAGGCACTTTGTGCAAGGCCAGCAATTAACCCTCAGTTGCCCCGCGAACAAGTAAACTTGGCCGATTGGGCGATGCAATGGAAGAGGAAGGGCTTGATTGACAAGATCATTGACCCTCTTCTTGTTGGCAACATCAATCCGGAATCAATGAAAAAATTTGCTGAGGCTGCTGAGAAATGTTTGGCTGATTATGGAGTTGATAGGCCTTCAATGGGAGATGTATTATGGAACTTGGAGTATGCATTGCAGCTTCAAGAAGCTTCCACAGAAGGAAAAACTGAAGATGAGAATGATGCCAAATCCACACATGCTTCTACACCTTCCACCAACTTAGATGACCATGAAACACCACCACAAGTTGCAACTATTAATCCACAACCAGTAGTAAACAACAACAGTTCAGCACAAGCACCACAAACTATTGATGGCCATTCTGGAACTGCAGTATTTGCACAGTTCAGTGATCTTAATGGCAGGTGA 2601 0.4233 MGKIEKKQNFSVPFLSSLLSFNMVILLAILFLAFFSSHAYSAVPVSSFTPKDNFLIDCGAENPPTLPDGRLFKSDPQANSFLQAKDDYKVSDGDDPKLPSPIYKTARIFIQEAKYSFHLVQPGFHWIRLHFYPVKNNVFDLHKATFSVNTNVHVLLHSFNVNNTDKPILKEYLINANESQFTLIFSPLKNSAAFINAIEVVSAPDNLIFDTGAALFPVGEFSGLTSYAIQPVYRLNNGGPLITSSNDTLGRIWENDEPFLTNKNLAKSVSVATNAIKFPTDTPTISPLVAPQSVYASATEMGDAGVNQPNFNVSWKFDVDTSFSYLVRLHFCDIVSKGLNELYFNVYVNGKMAISNLDLSATTGALSTPYYKDIVVNVTLMTEGLTVQVGPAKAEGGNANAIVNGIEVMKLSNSVDSLDGEFGVDGRKAGGSNRGTVAAAGFAMMFGAFVGLGAMVVKWHRRPQDWQKRNSFSSWLLPLHAGDTSFASSKSNMYSSTMGLGRYFSFAELQEATKNFDSKAIIGVGGFGNVYLGVIDEGTEVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENEEMILVYEYMPNGHFRDHLYGKNLPVLSWKQRLEVCIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENFTAKVSDFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPQLPREQVNLADWAMQWKRKGLIDKIIDPLLVGNINPESMKKFAEAAEKCLADYGVDRPSMGDVLWNLEYALQLQEASTEGKTEDENDAKSTHASTPSTNLDDHETPPQVATINPQPVVNNNSSAQAPQTIDGHSGTAVFAQFSDLNGR* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1270 866 Pfam Malectin-like domain 56 410 IPR024788 -
Lan8g1270 866 SMART serkin_6 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1270 866 PANTHER OS07G0166700 PROTEIN 38 840 IPR045272 GO:0004714|GO:0006468
Lan8g1270 866 CDD STKc_IRAK 522 786 - -
Lan8g1270 866 MobiDBLite consensus disorder prediction 794 853 - -
Lan8g1270 866 PANTHER BNAC03G60370D PROTEIN 38 840 - -
Lan8g1270 866 Gene3D - 53 204 - -
Lan8g1270 866 Gene3D - 228 413 - -
Lan8g1270 866 Gene3D Phosphorylase Kinase; domain 1 483 591 - -
Lan8g1270 866 Pfam Protein tyrosine and serine/threonine kinase 520 712 IPR001245 GO:0004672|GO:0006468
Lan8g1270 866 SUPERFAMILY Protein kinase-like (PK-like) 499 783 IPR011009 -
Lan8g1270 866 MobiDBLite consensus disorder prediction 809 853 - -
Lan8g1270 866 Gene3D Transferase(Phosphotransferase) domain 1 592 814 - -
Lan8g1270 866 ProSiteProfiles Protein kinase domain profile. 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan8g1270 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Lan8g1270 866 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1270 Lan-Chr8 19173190 19176368 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lan8g1270 Malectin_like 3.7e-39 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0773 7 6797638 6800717 Lan8g1270 8 19173190 19176368 LSH
Lan8g1270 8 19173190 19176368 Lan13g0707 13 6776595 6779641 LSH