Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1269 ATGGCTTCTTCTCACTCTCATTCTATTGCAGATATTAAGGGAGCAAAAGTTCTCATGGTCGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACCCTTGCTCTCTCTGGTTTCCGTGACATACACATCATTGACATGGACACCATAGAAGTCAGTAACCTGAACAGACAATTTTTATTTCGACAATCTCATGTTGGGCAATCCAAGGCTAAAGTTGCTAGGGATGCTGTTTTAAAATTTAGGCCTGATATAAGCATTACGTCATACCATGCGAACGTTAAAGATCCCGACTTCAATGTGGACTTCTTTAAGCAATTTAGTGTTGTTCTAAATGGACTAGACAATCTAGATGCACGCCGACATGTGAATCGCTTGTGCTTGGCAGCTGATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTCACTGTACATGTCAAGGGAAAAACAGAGTGCTACGAGTGTCAGCCTAAACCTGCCCCCAAGACATATCCTGTTTGTACTATCACAAGTACGCCGTCTAAGTTTGTTCACTGTATTGTGTGGGCAAAGGACCTACTTTTTGCAAAGTTACTTGGTGACAAGAATCAGGAAAATGATTTAAATGTACGATCAAGTGATGCTGCTAGCTCATCAGAAAATGTAGACGATGTATTTGAACGTAGGAAAGATGAAGACATTGAACAATATGGAAGGAAAATCTTTGATCATGTGTTTGGGTATAACATTGAATTAGCTTTGTCTAATGAAGAGACATGGAAAAATCGTTATAGACCAAAACCTATATACAGCAAGGATGTCTTGTCTGAGGAACTTGCTCCACAGAATGGAAATGTGGACGAAAATCATGCATCAGATGGTGGATTATCAGTCTCTGCTATGGCATCTTTGGGCATGAAGAACCCACAAGATATCTGGAGTGTTAACGAAAGTTCTAGAATATTTCTGGAAGCGCTGAGACTGTTTTTCACAAAAAGGGAGAAGGAGGTTGGCAATCTGTGCTTTGATAAAGATGATCAGTTAGCTGTGGAATTTGTTACCGCAGCTGCAAATATACGGGCTGCTTCATTTGGCATCCCTCTGCACAACCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCAACAACAAATGCCGTTATTGCTGGTTTGATTGTTATTGAAGCAATCAAAGTGCTGCGAAATGACATAAAAAGTTATAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCTGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCCGAGACACCCTTATCACTTGAAATAAACACAAACCGTTCGAAGTTGAAGGACTTGGTTGAAAAGATTGTCAAGGCAAAGCTTGGGATGAGTCTTCCTCTTATCATGAATGCTTCATCTCTTCTTTATGAAGCTGGTGATGTTGAGGATGACATGGTTGCAATTTATGAAGCCAACCTTGAAAAGGTGCTCGCTGAGCTTCCTTCTCCAGTAACAGGTGGTACGATGCTTACAATAGAGGATTATCAGCAGGAACTCAAGTGCAATATCAACATCAACCACAGAGAAGAATTTGATGAGGAGAAGGAACCTGACGGGATGGTTCTCTCAGGATGGACTCAACCTGTGTCCGCCCCAGAAAATAAAGACAAGTCTATTGGTAATGGTGCAAGCACCTCAGATGCAACAATAGCAGCTGCAGAATCTGAGAAGGACGATGATATAGGTATAGTTTCTCCCTTAAAGAAGAGAAAACTTCCTGATGATTCCGATATTTCAAAAGCTGCTGCCGAAACAAAGAATCACAAGCAGTTGCAAGTGATCGACGATGAAGACGATCTTGTTGTGCTTGAGGGGAACTTAGATGGCTTTAAAAAGAGAAGATTGTGA 1920 0.413 MASSHSHSIADIKGAKVLMVGAGGIGCELLKTLALSGFRDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPDISITSYHANVKDPDFNVDFFKQFSVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGKTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFAKLLGDKNQENDLNVRSSDAASSSENVDDVFERRKDEDIEQYGRKIFDHVFGYNIELALSNEETWKNRYRPKPIYSKDVLSEELAPQNGNVDENHASDGGLSVSAMASLGMKNPQDIWSVNESSRIFLEALRLFFTKREKEVGNLCFDKDDQLAVEFVTAAANIRAASFGIPLHNLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLRNDIKSYRMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDLVEKIVKAKLGMSLPLIMNASSLLYEAGDVEDDMVAIYEANLEKVLAELPSPVTGGTMLTIEDYQQELKCNININHREEFDEEKEPDGMVLSGWTQPVSAPENKDKSIGNGASTSDATIAAAESEKDDDIGIVSPLKKRKLPDDSDISKAAAETKNHKQLQVIDDEDDLVVLEGNLDGFKKRRL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1269 639 Pfam Ubiquitin-activating enzyme, SCCH domain 328 371 IPR019572 -
Lan8g1269 639 CDD Uba2_SUMO 16 437 - -
Lan8g1269 639 PIRSF SUMO_E1B 3 621 IPR030661 GO:0016925|GO:0019948
Lan8g1269 639 Pfam ThiF family 10 435 IPR000594 -
Lan8g1269 639 Gene3D - 4 110 IPR042449 -
Lan8g1269 639 MobiDBLite consensus disorder prediction 576 609 - -
Lan8g1269 639 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 12 485 IPR035985 GO:0008641
Lan8g1269 639 MobiDBLite consensus disorder prediction 549 609 - -
Lan8g1269 639 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 9 557 IPR045886 -
Lan8g1269 639 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 165 376 IPR023318 -
Lan8g1269 639 MobiDBLite consensus disorder prediction 551 575 - -
Lan8g1269 639 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 444 535 IPR028077 -
Lan8g1269 639 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 9 557 - -
Lan8g1269 639 Gene3D - 438 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1269 Lan-Chr8 19165630 19171909 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0774 7 6802430 6810287 Lan8g1269 8 19165630 19171909 LSH
Lan8g1269 8 19165630 19171909 Lan13g0708 13 6780138 6787398 LSH