Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1266 ATGGAGGAAGAGAAGAAGAGTGCTATAGTGAAGGTGGAACCAAAACCAAGAAAAGGGTTCATTGCAATAGTGATTGATTTGTTGGAGAAGTTGCTGGTTAAGTTGTTCCATAATTCTAAACGGCCCCATCATTACCTTGCTGGTAATTTTGCACCTGTTCCTGATGAGACCCCTCCAACTAAGGATCTTCCTGTTCTAGGCTACCTTCCGAATTGCTTGAATGGAGAATTTGTTAGGGTGGGACCTAATCCAAAGTTTGCTCCTGTGGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCTGCATATGTTTCCCGTTTTGTGAGAACTTCTCGTCTCAAACAAGAAGAATCCTTTGGAGCTGCCAAATTTATGAAGATTGGAGATCTCAAGGGTCTGTTTGGACTGTTAGTGGTTAACCTGCAACTGCTAAGATCTAAATTGAAAGTACTGGATGATTCTTATGGAAATTCAACAGCTAATACAGCACTTGTTTATCACCATGGGAAGCTTCTAGCACTCTCAGAAGTAGATAAGCCCTATGTTATTAAAGTTATTGAAGATGGTGATCTGCAGACACTCGGTTTGCTCGATTATGACAAGAGATTGAGCCATTCCTTCACTGCTCATCCAAAAGTTGACCCAATTACTGGCGAGATGTTTACATTTGGCTATTCGCAAACACCACCATATGTCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCCATAACAGTACCAGAGTCTGTCATGATGCATGACTTTGCCATCACAGAGAATTATGCAATATTCATGGATCTCCCCATGTATTTTAGACCAAAGGATATGGTCACTAAGAACAAACTGGTATACTCATTTGATTCAACCAAGAAAGCTCGTTTCGGTATTCTACCTCGATATGCTAAGGACGAGAAGCATATTAGATGGTTTGAACTTCCAACCTGCTTCATTTTCCACAATGCTAATGCCTGGGAGGAGGAGGATGAAGTTGTTCTAATCGCGTGCCGCATAGAGAAACCAGATTTGGACTTGGTCAGCGGAGCTCTCAAGGAAAAGCTTGAAAGTTTCGCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCACCTGCCCTGGATTTTCCGAGGGTGAACGAAAACTACACTGGCAGGAAGCAGCGATATGTATATGGAACCACATTAGACAACATCGCAAAAGTTACCGGAATCATTAAATTTGATTTGCATGCCAAACCAGATTCCGGAAAAACAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTAGGACCAGGGAGATTTGGTTCTGAGGCTGTTTATGTCCCGCGTGTTCCTAGCACCGATTCTGAAGAAGATGATGGATACTTGATCTTTTTCGTACATGACGAGAATAGCAGAAAATCATTTGTGCATGTCGTTGACGCAAGAACAATGTCGGCGAATCCTATTGCTGTTGTCGAATTGCCTCATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACAGAGGACCAATTGCAAGAACAGGCAAAACTGTGA 1620 0.4167 MEEEKKSAIVKVEPKPRKGFIAIVIDLLEKLLVKLFHNSKRPHHYLAGNFAPVPDETPPTKDLPVLGYLPNCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKAAYVSRFVRTSRLKQEESFGAAKFMKIGDLKGLFGLLVVNLQLLRSKLKVLDDSYGNSTANTALVYHHGKLLALSEVDKPYVIKVIEDGDLQTLGLLDYDKRLSHSFTAHPKVDPITGEMFTFGYSQTPPYVTYRVISKDGYMHDPVPITVPESVMMHDFAITENYAIFMDLPMYFRPKDMVTKNKLVYSFDSTKKARFGILPRYAKDEKHIRWFELPTCFIFHNANAWEEEDEVVLIACRIEKPDLDLVSGALKEKLESFANELYEMRFNMKTGEASQKKLSAPALDFPRVNENYTGRKQRYVYGTTLDNIAKVTGIIKFDLHAKPDSGKTKLEVGGNVQGLYDLGPGRFGSEAVYVPRVPSTDSEEDDGYLIFFVHDENSRKSFVHVVDARTMSANPIAVVELPHRVPYGFHAFFVTEDQLQEQAKL* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1266 539 Pfam Retinal pigment epithelial membrane protein 50 528 IPR004294 GO:0016702
Lan8g1266 539 PANTHER BETA-CAROTENE DIOXYGENASE 4 535 IPR004294 GO:0016702
Lan8g1266 539 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 1-3 4 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1266 Lan-Chr8 19097908 19123340 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0902 7 8266235 8274020 Lan8g1266 8 19097908 19123340 LSH