Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0935 ATGTTTTTTTTATTACCCATTATCCAATCCTTCCTTAAACCATGTCCTTGCATGTTCTTCTTCTTCTTTATACTTTCTTCTACTTGCTTCACTTCAACAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATATTAAGAGCTGGGATCCGGATGGTTATCTTGCCGTTGTTACGATTAACAACTTCCAACAATATCGCCATATCTCATCACCTGGGTGGTCACTAGGGTGGACATGGGCAAAGAAGGAGGTAATATGGAACATGGTCGGAGGGCAGGCTACTGAACAAGGGGATTGTTCGAAATTTAAGGGGAACACCCCACATTGCTGTAAAAAGGACCCGACAATCGTAGATTTACTTCCTGGAACACCTTACAATCAACAAATTTCAAATTGCTGCAAAGGTGGTGTACTCAGCTCATGGGCACAAGATCCAATCAATGCAGTTGCAGCATTTCAACTCAGTGTAGGTAGAGCTGGAACTACAAATAAAACAGTCAAATTGCCGAAAAACTTCACCTTGAAAGCACCGGGCCCAGGTTATACTTGTGGGCCAGCAAAGATCGTGAAACCAACTCAATTCATGACAGGAGACAAAAGGAGAGTGACCCAAGCACTCATGACGTGGAATGTGACGTGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACTTGCTGTGTTTCACTCTCATCCTTTTATAACGATACTATTGTACCATGCCCGACATGTTCATGCGGCTGCCAGGGCACCAAGTCTCAATCTGATAATTGTGTAGAGCCAGATTCACCGCATTTGGCATCAGTCGTTTCCAACCTCGGAAAGAATAGTCTCACATCTTTGGTTCAATGCACTCGTCATATGTGCCCAATCAAAGTTCACTGGCACATTAAGCTTAACTACAAGGAGTACTGGCGTGTGAAGGTCACTGTTACAAATTTCAATTACAGGATGAACTATTCTGACTGGAACTTGGTTATTCAACACCCGAACTTTGAGAACCTCACCGAACTTTTCAGTTTCAACTACAAGTCAATAACCCCTTATGGGACCATAAATGATACAGCAATGCTTTGGGGAATTAAGTTCTACAATGATTTTCTCATGCAAGCCGGTCCTATTGGCAATGTACAATCAGAGCTACTTTTCCGAAAGGATAAATCAACTTTCACTTTTGAGAAGGGTTGGGCTTTTCCTACAAGGATCTATTTCAATGGTGACAATTGTGTGATGCCACCACCTGATGCATATCCATGGTTACCTAACACCGGTTCCCGACGAGAAGTTTCGCTGCTTGCTATGATGATGGTCTCCTTGGTAGCCTTGGTATTTTATGCATTTGCTTAA 1365 0.4242 MFFLLPIIQSFLKPCPCMFFFFFILSSTCFTSTEAYDPLDPNGNITIKWDIKSWDPDGYLAVVTINNFQQYRHISSPGWSLGWTWAKKEVIWNMVGGQATEQGDCSKFKGNTPHCCKKDPTIVDLLPGTPYNQQISNCCKGGVLSSWAQDPINAVAAFQLSVGRAGTTNKTVKLPKNFTLKAPGPGYTCGPAKIVKPTQFMTGDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCQGTKSQSDNCVEPDSPHLASVVSNLGKNSLTSLVQCTRHMCPIKVHWHIKLNYKEYWRVKVTVTNFNYRMNYSDWNLVIQHPNFENLTELFSFNYKSITPYGTINDTAMLWGIKFYNDFLMQAGPIGNVQSELLFRKDKSTFTFEKGWAFPTRIYFNGDNCVMPPPDAYPWLPNTGSRREVSLLAMMMVSLVALVFYAFA* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0935 454 PIRSF COBRA 8 454 IPR006918 GO:0010215|GO:0031225
Lan8g0935 454 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0031225
Lan8g0935 454 PANTHER COBRA-LIKE PROTEIN 13 453 - -
Lan8g0935 454 PANTHER PROTEIN COBRA 13 453 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0935 Lan-Chr8 11096805 11100909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0935 11 449 COBRA Gene Family AT3G02210 73.094 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0935 - - gmx:100783820 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0935 8 11096805 11100909 Lan20g1329 20 19913624 19916762 LSH
Lan8g0935 8 11096805 11100909 Lan9g0114 9 1367996 1372147 PCT
Lan9g0113 9 1364768 1367357 Lan8g0935 8 11096805 11100909 PCT