Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0920 ATGGAACATGAAAGAAATGGAGAAAGAAACATGAATAATCAACAAACTCATGATTACCAATTAATAAGACAAGGTGGTGTCCCACAACAACAAGTTCAACCTCAAAAACCACAAAGAACTCAACAATGTCCTCGTTGTGAGTCTCTCAACACAAGGTTTTGCTACTACAATAACTATAACTTGACACAACCTCGTTACTTTTGTAAAGAATGTAGAAGGTATTGGACCCAAGGTGGAACATTGAGAAACATACCCATTGGTGGTAGTTGTCGTAAGAGAAAACATGCCAAAAATTCTTCAAATTCTCATGCACAACAACCACAACCACTAACCCTAACTCCTATAGTGGTTTCTTCCATCAATCCATTTCATGAAGGTGCCCATAATGGATATTTGTCTTCAATGGCAACAATGAGACCATCACAATCATACCCTTTTGCTCAATCTTCAAGACTTGGTGTTGATGTAGTTGGTTCTTCTTCTTCTTATTCTTCAAATTTAGGGTTTTCATCTAATTTCATTGTTGATTCTCTTCCCTCTCAAAACCAAATCCAACCATCACATTTCTACCAAATGGGCAACACAGAAAGAGATATAGCATCTCTTTATATGAGACAAGGTTTAGTTATTCCAACAAACATGTCTAATAGTAATAATATCAATGCTACTTCTCACAATGATTTGACTCAAAGCTTCACTAATAATGCAAATAATAGTAATATCAATTGCACCACTAGTTCTATTGGTTCTTCTCCTTTGATCCAAAATCAATGGTCTGATTTTCTAGGGTTTGGTCCTCTTCTTTGA 807 0.3569 MEHERNGERNMNNQQTHDYQLIRQGGVPQQQVQPQKPQRTQQCPRCESLNTRFCYYNNYNLTQPRYFCKECRRYWTQGGTLRNIPIGGSCRKRKHAKNSSNSHAQQPQPLTLTPIVVSSINPFHEGAHNGYLSSMATMRPSQSYPFAQSSRLGVDVVGSSSSYSSNLGFSSNFIVDSLPSQNQIQPSHFYQMGNTERDIASLYMRQGLVIPTNMSNSNNINATSHNDLTQSFTNNANNSNINCTTSSIGSSPLIQNQWSDFLGFGPLL* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0920 268 ProSitePatterns Zinc finger Dof-type signature. 43 79 IPR003851 GO:0003677|GO:0006355
Lan8g0920 268 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 6 250 - -
Lan8g0920 268 MobiDBLite consensus disorder prediction 87 109 - -
Lan8g0920 268 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 250 IPR045174 GO:0003700|GO:0006355
Lan8g0920 268 Pfam Dof domain, zinc finger 39 95 IPR003851 GO:0003677|GO:0006355
Lan8g0920 268 ProSiteProfiles Zinc finger Dof-type profile. 41 95 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0920 Lan-Chr8 10937054 10937860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0920 32 194 C2C2-Dof Transcription Factor Family AT5G60200 41.818 1.98e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan8g0920 zf-Dof 3.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0920 - - lang:109353896 485.723