Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0498 ATGAAGAAGATGGCAATTCACCATCATCACATCAATGACCATCTTGAACAACAACAACACAATGATAATGTTTCATCTGTCCTTGAAGCTCTTTACTGCGATGAAGAAGAAGGAGATTTATCTTCAGAAGAAAGTTATGTTACAACAACAAACAATGATAATACTTGTCTTCTTTTCCCTATGCTCTTGTTAGAGCAAGATTTGTTCTGGGAAGATGAAGAGTTAAACACTCTCTTCTCTAAAGAAAAGAATGAACATGAAACCTATTACAAAAACAATAATAATGAGTATGACAATGATATTAATAAGAATGTGGGTTTAGATGATTCTTCTCTTTGTGTGGCTCGTGTTGAAGCAGTTGAATGGATGCTAAAAGTGAATGGTTATTATGGTTTCTCTGCTCTTACTGCAACACTTGCTGTTACTTATTTCGATAGATTCCTTTCCAGCTTCCATTTTCAAAGGGAGAAGCCATGGATGATTCAGCTTGTAGCTGTTACTTGCATCTCTTTAGCAGCTAAAGTTGAAGAAACTCAAGTTCCTCTTCTCTTAGACCTTCAATTTCAGGTGGAAGATACCAAATGTATGTTTGAGGCAAAAACTATTCAGAGAATGGAGTTGCTTGTGTTATCTACCCTAAAGTGGAAGATGCACCCAGTCACACCACTCTCATTTCTAGATCACATTATAAGGAGGCTGGGATTGAAAACAAATCTTCACTGGGAATTTTTTAAGCGCTGTGAGCATCTTCTTCTATCTGTGCTATTAGATTCAAGATTTTCTGGTTGTCTTCCTTCTGTATTGGCCACTGCTACAATGCTGCATGTTATAGATCAGATTGAGCACAAGGATGGTATGGAATACAAAAATCAGCTTCTCAGTGTTCTCAAAATTAGCAAGGAGAAAGTAGATGAGTGTTATAAAGCCATTCTCGATCTTAAGCTTAAGGACTCCAATGCCAACAATTATGCTAATAAGAACCCTCTGAAGCGCAAGTATGACCAAATCCCTGGTAGCCCAAGTGGCACAATTGATGCTACTTTTAGCTCTGATGTTTCTAACGATTCTTGGTCAGTGGGGTCATCATCATTATACTCATCACCAGAGACAAAGCTTGTGTTAAAGAAGAGCAGAACCCAAGGTCAACAAATGAAATTGTCACCACTTAACAGGGTCATTGTCGGAATTGTTGCCACCTAA 1200 0.3792 MKKMAIHHHHINDHLEQQQHNDNVSSVLEALYCDEEEGDLSSEESYVTTTNNDNTCLLFPMLLLEQDLFWEDEELNTLFSKEKNEHETYYKNNNNEYDNDINKNVGLDDSSLCVARVEAVEWMLKVNGYYGFSALTATLAVTYFDRFLSSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQFQVEDTKCMFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTNLHWEFFKRCEHLLLSVLLDSRFSGCLPSVLATATMLHVIDQIEHKDGMEYKNQLLSVLKISKEKVDECYKAILDLKLKDSNANNYANKNPLKRKYDQIPGSPSGTIDATFSSDVSNDSWSVGSSSLYSSPETKLVLKKSRTQGQQMKLSPLNRVIVGIVAT* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0498 399 PANTHER CYCLIN D3.1 PROTEIN 40 371 - -
Lan8g0498 399 Gene3D - 115 218 - -
Lan8g0498 399 MobiDBLite consensus disorder prediction 1 20 - -
Lan8g0498 399 SUPERFAMILY Cyclin-like 105 218 IPR036915 -
Lan8g0498 399 PANTHER CYCLINS 40 371 IPR039361 -
Lan8g0498 399 SUPERFAMILY Cyclin-like 202 315 IPR036915 -
Lan8g0498 399 CDD CYCLIN 116 210 IPR013763 -
Lan8g0498 399 Pfam Cyclin, N-terminal domain 114 217 IPR006671 -
Lan8g0498 399 SMART Cyclin_C_2 220 352 IPR004367 -
Lan8g0498 399 Pfam Cyclin, C-terminal domain 220 334 IPR004367 -
Lan8g0498 399 SMART cyclin_7 121 211 IPR013763 -
Lan8g0498 399 ProSitePatterns Cyclins signature. 116 147 IPR006671 -
Lan8g0498 399 Gene3D - 219 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0498 Lan-Chr8 7235861 7238508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0498 16 313 Core Cell Cycle Gene Families AT4G34160 54.362 5.27e-106 315
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g0498 8 7235861 7238508 Lan20g0423 20 2949866 2952818 LSH
Lan8g0498 8 7235861 7238508 Lan4g1487 4 23982629 23984641 LSH
Lan17g1288 17 21131841 21134031 Lan8g0498 8 7235861 7238508 PCT
Lan18g0991 18 14982289 14984432 Lan8g0498 8 7235861 7238508 PCT