Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g0212 ATGGATACTGCTCAGTGGCCACAGGAGATGGTGGTGAAACCAATAGAAGACATAGTGGTAACAAAGCCTGCAACATCACTTGAAAGAAAGCCAAGGGCACAGAAAGAACAAGCCCTAATAAACTGTCCAAGGTGTCATTCCACCAACACAAAGTTCTGTTACTACAACAACTACAGTCTCACACAGCCAAGATATTTCTGCAAGGCTTGTAGAAGGTACTGGACTGAAGGTGGGACCCTCAGAAACATTCCTGTAGGTGGTGGATCAAGAAAGAACAAGAGATTGTCTAATTCTGTTTCTTCTTCCTCTAATAAGAAAGTTTCAGATCTACTCACACCTCAAAACCCTAATGTTCATGATGGCCATGATCTAAACTTGGCTTTCAGAATTAACAATACTAGTGTATCTGCTTCAGCTTCTTCTACTATTACTACTAATAATACTACTACTGCAGCTTCTACTTCTCAACTTTCAGTAATGGAGCTTCTTAATGGAATTACTTCAGGTTCAAGAGGTTTGATGAGTTCTTTCATGCCTATGCATGCTCCAGTTTCAGGAGATCCAAATTCAGTTTACACTTGTGAGTTTCCTATGCAAGAGTTTAAGCAAAATTTGAGTTTCTCTTTGGATGGGATTGGAAACCTTAATGGTACTGTTCAAGAGACAAGTGGGAGGCTTTTGTTTCCTTTTGAGGATTCAAAACAAGTTGCTAGTACCAACAACACTACAATAATGGATCATAATAATAATAAGGAGCAACAAAATGGTGATTCAAATGGTGGGTATTGGAGTGGAATGTTAGGAGGAGGATCATGGTAA 819 0.3932 MDTAQWPQEMVVKPIEDIVVTKPATSLERKPRAQKEQALINCPRCHSTNTKFCYYNNYSLTQPRYFCKACRRYWTEGGTLRNIPVGGGSRKNKRLSNSVSSSSNKKVSDLLTPQNPNVHDGHDLNLAFRINNTSVSASASSTITTNNTTTAASTSQLSVMELLNGITSGSRGLMSSFMPMHAPVSGDPNSVYTCEFPMQEFKQNLSFSLDGIGNLNGTVQETSGRLLFPFEDSKQVASTNNTTIMDHNNNKEQQNGDSNGGYWSGMLGGGSW* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g0212 272 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Lan8g0212 272 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Lan8g0212 272 MobiDBLite consensus disorder prediction 83 118 - -
Lan8g0212 272 MobiDBLite consensus disorder prediction 91 118 - -
Lan8g0212 272 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 110 IPR045174 GO:0003700|GO:0006355
Lan8g0212 272 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 128 269 IPR045174 GO:0003700|GO:0006355
Lan8g0212 272 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 128 269 - -
Lan8g0212 272 PANTHER DOF ZINC FINGER PROTEIN DOF4.6-LIKE 1 110 - -
Lan8g0212 272 MobiDBLite consensus disorder prediction 244 261 - -
Lan8g0212 272 MobiDBLite consensus disorder prediction 244 272 - -
Lan8g0212 272 Pfam Dof domain, zinc finger 39 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g0212 Lan-Chr8 3578429 3580269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g0212 1 272 C2C2-Dof Transcription Factor Family AT4G24060 40.456 2.90e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan8g0212 zf-Dof 1.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g0212 - - tcc:18606009 269.626