Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1300 ATGGTTTATACTTCAATCCCAGCTTATATTGATCCAGCCAACTGGCAGCAACAGCAACCAAATCATCATGTTGGCAACAATGTTACTAGCTCACATCTTCTTCCACCACCCCCTCCGCCACTAGCCCAGTCTGATGGAGCTGGTGCAGGTATTGGTTCCATCAGGCCGGGTTCGCTGGCAGATAGGGCTAGGATGGCTAACATACCTATGCAAGAAGCACCACAAAAATGTCCAAGATGTGAATCTACAAACACCAAGTTTTGCTACTTCAACAACTACAGCCTCTCACAGCCCCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACACGTGGCGGGGCTTTGAGGAGCGTCCCTGTTGGCGGCGGCTGCCGTAGGAACAAGAGGAGCAAAGGAACCAGTAGTAGCAACAACAGCTCCAAATCGTCGCCGGTGAGCTCGGACCGCCAAGCACTCAGTGCCAATTCCAACAACTCAATCTCCTCTTCTGATATGGTAGCTGGCCTTGGACCAGCTGTGCCGCCACAGCTCCGATACATGTCACCATTGCATCAACTTGGTGATAATTTTGCAAGTGGTGGAGAAATAAGCTTAAACTATGGCCTTAACTATGGCAACATTTCAAGCCAAATGGGTGGAGTAGGAGACTTGAGTTTTCACATTGGAAATGCTTTAGGCCATGGTGGCGGTGGTGGCGGCGGCGGTTCTATTTTATCTGCAGCTGGTTTGGAACAATGGAGGGTTCCACAAACACACCAATTTCCCTTCTTGACTGGTTTGGAATCTTCATCACATGGGTTGTACCACCAATTTGAAGGTGGTAGCACTAGTCCGGCAACCGGATACGGCGGTGTCCGGCCTAAGGTATCAACTTCTGGTGTGATATCTCAGATGGCTTCAGTAAAAATGGAAGAGAGTGGTCAACAACTTAATTTGTCAAGGGAATTTTTGGGGATGAATAGTTCAGCTAGTGAGCAATATTGGAGTACCAGTGGTGGTGGAACTACAACACCAGCATGGACAAATCTTTCTGGCTTTAACTCTACCAGTAATCAGCTATAG 1062 0.4849 MVYTSIPAYIDPANWQQQQPNHHVGNNVTSSHLLPPPPPPLAQSDGAGAGIGSIRPGSLADRARMANIPMQEAPQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKGTSSSNNSSKSSPVSSDRQALSANSNNSISSSDMVAGLGPAVPPQLRYMSPLHQLGDNFASGGEISLNYGLNYGNISSQMGGVGDLSFHIGNALGHGGGGGGGGSILSAAGLEQWRVPQTHQFPFLTGLESSSHGLYHQFEGGSTSPATGYGGVRPKVSTSGVISQMASVKMEESGQQLNLSREFLGMNSSASEQYWSTSGGGTTTPAWTNLSGFNSTSNQL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1300 353 Pfam Dof domain, zinc finger 74 129 IPR003851 GO:0003677|GO:0006355
Lan7g1300 353 ProSiteProfiles Zinc finger Dof-type profile. 75 129 IPR003851 GO:0003677|GO:0006355
Lan7g1300 353 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 5 351 - -
Lan7g1300 353 MobiDBLite consensus disorder prediction 128 165 - -
Lan7g1300 353 MobiDBLite consensus disorder prediction 327 353 - -
Lan7g1300 353 ProSitePatterns Zinc finger Dof-type signature. 77 113 IPR003851 GO:0003677|GO:0006355
Lan7g1300 353 MobiDBLite consensus disorder prediction 119 167 - -
Lan7g1300 353 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 351 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1300 Lan-Chr7 18068486 18070249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1300 54 332 C2C2-Dof Transcription Factor Family AT5G02460 41.379 2.45e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan7g1300 zf-Dof 2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1300 - - gmx:100796820 408.683