Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g1099 ATGGCTTCTTCTATTTCATCTTCAACTCCACGTTCCATTGATGAGATCTTCAATGACTTCAATTCTCGTCGCACTGCTATTCTTCGTGCACTCACCTATGATGTTGATGAGTTCTATTCCCTCTGTGATCCTGAGAAAGAGAACATGTGCTTATATGGGCTCCCCAATGAGTCATGGGAGGTTACTCTGCCAGCAGAAGAAGTTCCACCAGAACTTCCAGAACCAGTGTTGGGGATCAATTTTGCTAGAGACGGGATGAACCGTAAAGATTGGCTTTCTTTGGTTGCAGTGCACAGTGATTGCTGGTTGAATTCTGTGGCATTCTATTTTGGAGCCAGGCTAAATAGAAATGAGAGGAAGCGCCTGTTCAGCCTGATGAACGAGCTGCCAACTATCTTTGAAATTGTATCGGGAAGGAAACCTCTGAAAGACAAGACCACCACCACAGATAGTGGCAGCAAATCTCGGGGCAGCTTAAAGAGATCAAATGAAGGACAAGTGAAGAGTAATTCGAAGTTACCCGATGAAAGTAACGGCGAGGATGAGGAGCATGGTGAAACCCTTTGTGGGAGCTGTGGTGGAAATTACAGTGGTGATGATGAGTTCTGGATTGGTTGTGACATTTGTGAGAGATGGTATCATGGGAAGTGTGTGAAGATTACTCCAGCAAAGGCTGATAGTATTAAGCAGTATAAATGCCCTTCTTGTAACTCCAAGAAGGGTAGGCAGTAA 732 0.4467 MASSISSSTPRSIDEIFNDFNSRRTAILRALTYDVDEFYSLCDPEKENMCLYGLPNESWEVTLPAEEVPPELPEPVLGINFARDGMNRKDWLSLVAVHSDCWLNSVAFYFGARLNRNERKRLFSLMNELPTIFEIVSGRKPLKDKTTTTDSGSKSRGSLKRSNEGQVKSNSKLPDESNGEDEEHGETLCGSCGGNYSGDDEFWIGCDICERWYHGKCVKITPAKADSIKQYKCPSCNSKKGRQ* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g1099 243 ProSiteProfiles Zinc finger PHD-type profile. 186 239 IPR019787 -
Lan7g1099 243 CDD PHD_AL_plant 188 239 IPR044104 -
Lan7g1099 243 ProSitePatterns Zinc finger PHD-type signature. 189 236 IPR019786 -
Lan7g1099 243 Pfam Alfin 13 137 IPR021998 GO:0006355|GO:0042393
Lan7g1099 243 SMART PHD_3 188 237 IPR001965 -
Lan7g1099 243 MobiDBLite consensus disorder prediction 142 184 - -
Lan7g1099 243 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 1-LIKE 5 243 - -
Lan7g1099 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 237 IPR013083 -
Lan7g1099 243 PANTHER CPG BINDING PROTEIN 5 243 IPR045104 GO:0006355|GO:0042393
Lan7g1099 243 MobiDBLite consensus disorder prediction 151 173 - -
Lan7g1099 243 SUPERFAMILY FYVE/PHD zinc finger 177 240 IPR011011 -
Lan7g1099 243 Pfam PHD-finger 189 238 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g1099 Lan-Chr7 12277452 12280710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g1099 7 243 Alfin-like Transcription Factor Family AT5G05610 74.790 8.53e-119 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Lan7g1099 Alfin 1.5e-65 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g1099 - - zju:107413853 389.423