Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0901 ATGCCCGGAAAACCAGATACCGATGATTGGCAAGTAGACCGTGGCGAGCAGATTCAGTTTCAATCATCCATTTACTCTCAGTCTCAGCCTTGGTGGCAGGGAGTGAGGGAAAATGCAGCCAAATCTTCTTCAGCAGATCAGCTAAATGGCTCAGTCATGAATGGTGTAGCTCAATCAGAGACCAATGAGGCACTGCTTGATTTCAATAAACAGATGCAGCCTGGAGCTGATAAATCAGGTGGGGATGTTGCCAAAGAGCACCAAAGCATCAAACATGCTCTGTCTTCAACTCCATATACCATGGGAAAACACCTTGGTCCGAATTCCCTGATGGAACTTGTTGGTCATTCAGTTGTTTTAACATCTTATCCGTATTCAGATGCACAGTATGGTGGACTCTTGACTAATTTTGGGCAACAAGCTATGATAAACCCTCAATTGTATGGAATGCATCATACTAGGATGGCTTTGCCACTTGAAATGGAGGAGGAGCCTGTTTATGTTAATGCAAAGCAGTATCATGGTATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGCTCGAAAAGAAAGTGATTAAAGCTAGAAAGCCGTATCTGCATGAATCCCGTCACCTACATGCACTGAGAAGGGCAAGGGGTAATGGAGGCCGCTTTCTCAATACAAAGAAGCTTGAAGGTAGCAGTTCCGACGGAACCATACGCAACAATAATGGTGCAAACCCCGTAACATTATCTGGCAGCTCATCTGCAGCTCAACATTTGGTTACCAACAATGGACTTCTCGTCTCATCAAATGATCATTACGGTGCATCGCAGTCCATAGTTGAGGACGTGCATCAGGTGCAGAGTTTCACCATTGGTTACCATGATGGCAATGGTCTTTCATCACCATACTATTCACAGTTAAATGGAAAAAAAGACGGAGACTGCTTTGGTAGAGAGAGGGAAAGTGTGCGCATGCATGGAGCCCCAAACGGGGCTGTAAAGTAA 993 0.4532 MPGKPDTDDWQVDRGEQIQFQSSIYSQSQPWWQGVRENAAKSSSADQLNGSVMNGVAQSETNEALLDFNKQMQPGADKSGGDVAKEHQSIKHALSSTPYTMGKHLGPNSLMELVGHSVVLTSYPYSDAQYGGLLTNFGQQAMINPQLYGMHHTRMALPLEMEEEPVYVNAKQYHGILRRRQSRAKAELEKKVIKARKPYLHESRHLHALRRARGNGGRFLNTKKLEGSSSDGTIRNNNGANPVTLSGSSSAAQHLVTNNGLLVSSNDHYGASQSIVEDVHQVQSFTIGYHDGNGLSSPYYSQLNGKKDGDCFGRERESVRMHGAPNGAVK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0901 330 ProSitePatterns NF-YA/HAP2 subunit signature. 167 187 IPR018362 GO:0003677|GO:0016602
Lan7g0901 330 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 164 219 IPR001289 GO:0003700|GO:0006355
Lan7g0901 330 MobiDBLite consensus disorder prediction 218 247 - -
Lan7g0901 330 PANTHER TRANSCRIPTION FACTOR Y SUBUNIT A-1, PUTATIVE-RELATED 23 329 - -
Lan7g0901 330 SMART cbf3 161 222 IPR001289 GO:0003700|GO:0006355
Lan7g0901 330 MobiDBLite consensus disorder prediction 222 247 - -
Lan7g0901 330 Gene3D - 162 223 - -
Lan7g0901 330 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 23 329 IPR001289 GO:0003700|GO:0006355
Lan7g0901 330 PRINTS CCAAT-binding transcription factor subunit B signature 165 187 IPR001289 GO:0003700|GO:0006355
Lan7g0901 330 PRINTS CCAAT-binding transcription factor subunit B signature 196 219 IPR001289 GO:0003700|GO:0006355
Lan7g0901 330 ProSiteProfiles NF-YA/HAP2 family profile. 162 222 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0901 Lan-Chr7 8258277 8264002 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lan7g0901 CBFB_NFYA 6.9e-26 No_clan