Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0886 ATGTTACAAAATTTGTCTACCAAGAGAAACCCAGAAATGGATTATCCACAACAACATTCTCACCAATACAATTCTGGTTCATTGGTAACAAGCCTTGTGGAAAATAACAACAACAATGGTTGTATCAATGAAGAAACTTTCAGAAGTGAGAATCATCATCAGCATTATACTCCTTCTACCACAAGCTCAGAAATGGAAACCATGTTTGCTAAGTTGATAGCATCACCTTCTAACAATAGGTTGAGCAATTCAGAACTTTTGCATCATGAGTTTGGAGGAGGCAAAACAGTGAAGGAAGAAACAGGGGACTCTGTTTCACAGAAACCACAGCATAACAACAATGGTTACACTTATGGATCTCAGGCTCAGTTAGTTTACCAATCTCAGCAAATTCAAGGATTGAGAAATGGTTCTGTTGGTGCTGTGAATGCTTTTGATGGATCATTCAGTGCAGTGACTTCAATGGATTCAGAGAATTCCACACAAACTAAGATGGGTTCCAATCTCATTAGGCAAAAGAGTTCCCCTGCTGGATTTTTCAACAATTACTCTGTTGATAATGGCCATGTAGCATCGAGAGATGTAGGAAGTTTTAGAGCTTGTGATGTCTCAAATGGACAAGCTACTACTACATCAACTAGTGGGTTGCATGGTACTTTGAACTTCACATCAAAGATGCCACAGATTTCTGAAAATGGAAATGAAGACCTTGAAGCAAATTATTTTAAAAGTAGAAGCATTGGAAATGATAATAACAACAGTGAATGTTATATGCCTAGTTTCACCAATGACTTTTGGGATGGTTCTGCATTTAATGCCCAAAAAAAGGCCAATAACAATGGTGAAATCATGTTTTCCATTTCAAATGCTATGGAAACTCAGGATGAGGATTTTGGATACCAAAAACATGGTTTAACCCACCATATGAGTCTGCCTAGTTCTATTAAGATGTCTGGCATGGAAAAGCTTTATCAAATTCAAGGATCTGTGCCATGGAAAATTCGAGCCAAAAGAGGCTTTGCCACTCATCCTAGAAGCATTGCAGAAAGGGAAAGAAGAACGCGAATTAGCTCAAGAATGAAGAAATTGCAAGACCTTTTCCCAAAATCAGACAAGCAAACAAACACTGCAGATATGTTGGATTTGGCAGTTCAGTACATCAAGGACCTAAAGAAACAAGTTAAGATACTCACAAATACTAAGGCAAAGTGCATTTGTCCAAGCAATTAG 1230 0.3797 MLQNLSTKRNPEMDYPQQHSHQYNSGSLVTSLVENNNNNGCINEETFRSENHHQHYTPSTTSSEMETMFAKLIASPSNNRLSNSELLHHEFGGGKTVKEETGDSVSQKPQHNNNGYTYGSQAQLVYQSQQIQGLRNGSVGAVNAFDGSFSAVTSMDSENSTQTKMGSNLIRQKSSPAGFFNNYSVDNGHVASRDVGSFRACDVSNGQATTTSTSGLHGTLNFTSKMPQISENGNEDLEANYFKSRSIGNDNNNSECYMPSFTNDFWDGSAFNAQKKANNNGEIMFSISNAMETQDEDFGYQKHGLTHHMSLPSSIKMSGMEKLYQIQGSVPWKIRAKRGFATHPRSIAERERRTRISSRMKKLQDLFPKSDKQTNTADMLDLAVQYIKDLKKQVKILTNTKAKCICPSN* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0886 409 MobiDBLite consensus disorder prediction 94 116 - -
Lan7g0886 409 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 408 - -
Lan7g0886 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 390 IPR011598 GO:0046983
Lan7g0886 409 MobiDBLite consensus disorder prediction 1 63 - -
Lan7g0886 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 400 IPR036638 GO:0046983
Lan7g0886 409 SMART finulus 346 396 IPR011598 GO:0046983
Lan7g0886 409 Gene3D - 342 405 IPR036638 GO:0046983
Lan7g0886 409 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 24 408 - -
Lan7g0886 409 Pfam Helix-loop-helix DNA-binding domain 346 390 IPR011598 GO:0046983
Lan7g0886 409 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0886 Lan-Chr7 8016724 8020329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0886 168 408 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 44.130 1.46e-47 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan7g0886 HLH 2.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0886 - - gmx:100795896 499.975