Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0775 ATGGACTCATCGGTTAATGTTCAAATTTTTCCGGCTAAACGCCCCGCTTCTACCGTGTTCTCTTCTGAGGGACAAAAAAGATTAAAAATATCCAGTGATAGCCTTCCGTACTCAGAACTTGGAAAAACTGAGCAGAAGACACCCGAGAAATCATCAAATGTTGTGGATTATAGCAATCCGTTTGCAGTATCTGATTTCCTCAATTGTTTAGACAGTGGGAAATTTGGAAGTGTAACAAAGGACATAGAGTCTCTTTGGACTCGAAAAATGCAAATACTGGGGACTTACTTTGCCAAATATCCATCACTTCTTGATCACTTAGTGAACGTGGTAGTGAATCATGAAGAAACCCATACGCTGGAATGTCAGCAAGTTGCTGTTTTGGCACAGCAAAATGTCAGTGATTTGGAGGTTAAGCACATTGACAAGCATGTTCCACCAGCACCATCATCTGTTGTGATAATTGATTCAGATGACGAGGACGATAGAGATCAAAAAACATTTCTTCCATTTCATAAAGTTATGTTGCCGAATCAACCGTCTCCTGCAGTGAAAATGGCTGAGACTCATCCTCCCATTCGTTACAGTGAAGAAAATGAATATCTAAAATTTGAGACAAGTTTTGCTGATAAAGGGAACAGTGGGAAAGGAAAAGGCAAACATCTTGCTGATAAAGGTAATAGTAGTCAAGACAAAGGTGTTTATGTTGGTGTCGCGGATGAAGAAGATGACCATATTGATACAAAGGATGAAGAACTAGATGATATTTGGCGGGAGATGTCAATGGCAATAGAATGCTCCAAAGATGTTTCTGTGAACCCTCTGCCTGATGAAGAACCAAAAAAAGATGAGGACTGTGATCATTCTTTTGTTTTAAAAGATGATCTTGGTTACGTTTGTCGCGTTTGTGGGGTTATTGACAGAGGAATTGAAACCATTTTTGAGTTCCAGTACAAGGTTAAAAGGAGTACTAGAACTTATGTGTCTGATTCATGGAATGCCAAAGAAAAAGATGCATTTGGAATTAAGATTGTTGAGGACGATCTCTTGGTAACTGATATATCAGCGCACCCTAGGCACATGAAACAAATGAAGCCTCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAACCTTGCAGGTGACCATCCTGGGGGCTGTATCTTGGCACATGCTCCAGGATCTGGGAAGACATTCATGATAATCAGTTTCATGCAGAGTTTTCTTGGCAAGTATCCTAATGCTAGACCTCTAGTGGTTCTTCCTAAGGGGATACTATCAACTTGGAAAAAGGAGTTCCAAACATGGCAAGTGGAGGACATACCATTGTATGACTTTTACACTGTGAAGGCAGACAGTAGATCTCAACAACTGGAAGTGTTGAAACAGTGGGTGGAGCGGAAGAGCATCCTTTTCTTAGGGTATAAACAGTTCTCTTCTATCATATGTGAGAATGGAACTAGCAGCTCATCAACAGCTTGCCAAGAGATATTGCTAAAGGTTCCTTCCATTCTCATTTTAGATGAAGGGCACAATCCAAGGAATGATAATACTGATATGGTACATTCCCTTGCTAAAGTACAAACCCCTAGAAAAGTTGTATTGTCAGGAACTTTATATCAGAATCATGTCAAGGAGGTCTTTAACATCTTAAATCTTGTGAGACCAAAGTTTTTGAAGATGGAAACTTCTAGGCTTATTGTCAAGCGCATTTTTAGTAGAGTACATAATCCTTCTGGTAAAAGAGGCTTCTTTGATTTGGTAGAAGATACTTTGCAAAAAGACCCAGATTTCAAAAGGAAAGTGACTGTTATACAAGACTTACGGGAGATGACTAGCCAGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTTGTTGAATTTACTGTGGTGCTCAATCTTACCCCTAGACAGAAGCATGAAGCTGAGAAATTGAAGAAGTTATCTAGGAAGTTTAAGATTTGTTCTGTGGGTAGTTCTGTCTATCTTCATCCCAAATTGAAGCCTCTTGCTGAAAAATGTGGTGAAAATAGCATATCTGATAACATAAAGGAATTGGATGATATCATAGAGAAACTAGATGTGAGAGATGGAGTGAAGTCAAAATTCTTTCGCAACATGTTAAACCTATGTGACTCAGCAGGGGAGAAGGTTCTGGTTTTTAGCCAATACCTCTTACCTCTGAAATATTTAGAGAAGTTAGCTATGAAGTGGAAGGGTTGGAGTCTTGGGAAAGAAATCTTTGTCATCTCAGGAGAATCAAGCACTGAAGAAAGAGAATGCTCCATGGAGAAATTTAACAATTCTCCTGACGCCAAGGTCTTCTTTGGCTCAATCAAGGCATGTGGAGAGGGCATATCACTGGTTGGAGCATCCCGCGTCATTATTTTGGATGTTCATCTCAATCCATCAGTTACTCGCCAAGCTATTGGCCGTGCTTTCCGGCCAGGACAGAAAAAAAAAGTCTTTGTATATCGGTTGATAGCTGCTGATTCTCCAGAAGAAGATGATCACAGTACTTGTTTCAAGAAGGAATTAATTTCGAAAATGTGGTTCGAATGGAATGAGTATTGTGGTGATCGAGCTTTTGATGTTGAGGCAGTTCCTGTGAAAGAATGTGGTGATCTTTTTCTTGAAAGTCCAATGTTAGGGGAAGATGTTAAAGCTTTGTATAAAAGGTAG 2697 0.3956 MDSSVNVQIFPAKRPASTVFSSEGQKRLKISSDSLPYSELGKTEQKTPEKSSNVVDYSNPFAVSDFLNCLDSGKFGSVTKDIESLWTRKMQILGTYFAKYPSLLDHLVNVVVNHEETHTLECQQVAVLAQQNVSDLEVKHIDKHVPPAPSSVVIIDSDDEDDRDQKTFLPFHKVMLPNQPSPAVKMAETHPPIRYSEENEYLKFETSFADKGNSGKGKGKHLADKGNSSQDKGVYVGVADEEDDHIDTKDEELDDIWREMSMAIECSKDVSVNPLPDEEPKKDEDCDHSFVLKDDLGYVCRVCGVIDRGIETIFEFQYKVKRSTRTYVSDSWNAKEKDAFGIKIVEDDLLVTDISAHPRHMKQMKPHQVEGFNFLVRNLAGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKQWVERKSILFLGYKQFSSIICENGTSSSSTACQEILLKVPSILILDEGHNPRNDNTDMVHSLAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKMETSRLIVKRIFSRVHNPSGKRGFFDLVEDTLQKDPDFKRKVTVIQDLREMTSQVLHYYKGDFLDELPGLVEFTVVLNLTPRQKHEAEKLKKLSRKFKICSVGSSVYLHPKLKPLAEKCGENSISDNIKELDDIIEKLDVRDGVKSKFFRNMLNLCDSAGEKVLVFSQYLLPLKYLEKLAMKWKGWSLGKEIFVISGESSTEERECSMEKFNNSPDAKVFFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLIAADSPEEDDHSTCFKKELISKMWFEWNEYCGDRAFDVEAVPVKECGDLFLESPMLGEDVKALYKR* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0775 898 MobiDBLite consensus disorder prediction 212 232 - -
Lan7g0775 898 PANTHER PROTEIN CHROMATIN REMODELING 35 19 898 - -
Lan7g0775 898 Pfam Helicase conserved C-terminal domain 715 821 IPR001650 -
Lan7g0775 898 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 19 898 IPR044567 GO:0080188
Lan7g0775 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 335 559 IPR027417 -
Lan7g0775 898 Gene3D - 332 578 IPR038718 -
Lan7g0775 898 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 708 871 IPR001650 -
Lan7g0775 898 CDD SF2_C_SNF 696 833 - -
Lan7g0775 898 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 378 557 IPR014001 -
Lan7g0775 898 SMART ultradead3 360 569 IPR014001 -
Lan7g0775 898 SMART helicmild6 737 822 IPR001650 -
Lan7g0775 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 860 IPR027417 -
Lan7g0775 898 Pfam SNF2-related domain 384 645 IPR000330 GO:0005524|GO:0140658
Lan7g0775 898 Gene3D - 628 877 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0775 Lan-Chr7 6819094 6825347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Lan7g0775 SNF2_N 1.2e-19 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0775 7 6819094 6825347 Lan8g1268 8 19155715 19162683 LSH