Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0763 ATGTCATTGTTATCAATGGAGTCTCTAGTTCTTCAACTCCATGAAATCTCAGCTGTCAAATTTGGCAATTTCAAGCTCAAATCTGGCATCTCCTCGCCAATCTACATAGACCTCCGGCTCGCTATATCTTACCCTTCTGTCCTCCGACAAATTTCTCAAACCCTCATTTCCTCTGTCTCTAAAACTTCATTTGACCTTGTTTGTGGTGTCCCATACACTGCTCTACCAATTGCCACTTGCGTGTCTGTCACTCAAAACATCCCTATGGTCATGCGCCGTAAGGAAATCAAAGACTATGGCACTTGTAAAGCCATTGAAGGTGATTTCAAAACTGGCCAAAGTTGCTTGATAATCGAGGATCTAGTTACTAGCGGCACATCAATTTTGGAAACTGCTGCACCATTGCGTTCCATTGGGTTGAAGGTCAGCGATGCTGTTGTTTTGATCGATAGAGAGCAAGGTGGGAGAGAGAATTTGGAGAGTAATGGAATCAATCTGCATGCCATTCTGAAATTAACTGAAATGGTGAAAATTTTGAGGGAAAAAGGAAAGGTTGATGGGGAGATGGTAGGAATTGTTATGAGATTCTTAGAGGAAAATCGGAAGGTTGCTGCTATGGTAACTAGAGCTAAGGTGAAGGCCTTGTCATTTTTGGAGAGGGCTAACTTGTCGAAGAATCCGACAGGAAAAAGGTTATTTGAGATAATGGTTGAGAAGGAGAGTAATCTGTGTTTGGCTGCAGATGTTGGAACTGCAGCTGAATTGCTTGAAATTGCTGACAAGGTTGGGCCTGAGATATGCTTACTGAAAACGCATGTGGATATTCTTCCAGATTTTACACCCGACTTCGGTTCTAAGCTTCGCTCGATTGCAGAAAAACATAACTTCTTGATCTTTGAAGATCGCAAATTTGCTGACATTGGTAACACGGTTACCAAGCAGTTTGAAGGAGGGATCTTTCATATACTGGATTGGGCTGATATAGTAAATGCTCACATTATCTCTGGTCCTGGAATTGTGGATGGACTGAAATTGAAGGGTTTGCCTCGTGGAAGGGGTTTGTTGCTGCTCGCTGAAATGAGTTCAGCCGGTAACCTTGCCAAGGGAGATTATACCACTGCTGCGGTGAAAATTGCTGAGGATCATTCTGACTTTGTTATCGGCTTCATCTCAGTAAATCCAGCATCATGGCCCGGAGCATCCATAAATCCCTCTTTCATTCACGCAACTCCTGGAGTTCAAAAGGTGGCGTGTAGTGATGGTTTAGGGCAGCAATATAACACTCCATATTCTGTTGTCCATGATAGGGGTAGTGACATTATCATAGTGGGCCGTGGCATCATCAAGGCAGAAAATCCATCGGAGGCAGCTCGTGAGTACCGCCTTCAAGGATGGGATGCATATTTGGCCAAGTGCGGCTGA 1422 0.4395 MSLLSMESLVLQLHEISAVKFGNFKLKSGISSPIYIDLRLAISYPSVLRQISQTLISSVSKTSFDLVCGVPYTALPIATCVSVTQNIPMVMRRKEIKDYGTCKAIEGDFKTGQSCLIIEDLVTSGTSILETAAPLRSIGLKVSDAVVLIDREQGGRENLESNGINLHAILKLTEMVKILREKGKVDGEMVGIVMRFLEENRKVAAMVTRAKVKALSFLERANLSKNPTGKRLFEIMVEKESNLCLAADVGTAAELLEIADKVGPEICLLKTHVDILPDFTPDFGSKLRSIAEKHNFLIFEDRKFADIGNTVTKQFEGGIFHILDWADIVNAHIISGPGIVDGLKLKGLPRGRGLLLLAEMSSAGNLAKGDYTTAAVKIAEDHSDFVIGFISVNPASWPGASINPSFIHATPGVQKVACSDGLGQQYNTPYSVVHDRGSDIIIVGRGIIKAENPSEAAREYRLQGWDAYLAKCG* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0763 473 Pfam Phosphoribosyl transferase domain 54 157 IPR000836 -
Lan7g0763 473 PANTHER OROTATE PHOSPHORIBOSYLTRANSFERASE 6 472 - -
Lan7g0763 473 Hamap Orotate phosphoribosyltransferase [pyrE]. 1 229 IPR023031 GO:0004588|GO:0006221
Lan7g0763 473 PANTHER PHOSPHORIBOSYLTRANSFERASE, OROTIDINE 5-PHOSPHATE DECARBOXYLASE 6 472 - -
Lan7g0763 473 SUPERFAMILY PRTase-like 8 191 IPR029057 -
Lan7g0763 473 SMART OMPdecase_2 242 460 IPR001754 GO:0004590|GO:0006207
Lan7g0763 473 TIGRFAM pyrE: orotate phosphoribosyltransferase 13 174 IPR004467 GO:0004588
Lan7g0763 473 CDD PRTases_typeI 64 171 IPR000836 -
Lan7g0763 473 Pfam Orotidine 5'-phosphate decarboxylase / HUMPS family 241 460 IPR001754 GO:0004590|GO:0006207
Lan7g0763 473 Gene3D Aldolase class I 212 473 IPR013785 -
Lan7g0763 473 ProSitePatterns Orotidine 5'-phosphate decarboxylase active site. 298 311 IPR018089 GO:0004590|GO:0006207
Lan7g0763 473 SUPERFAMILY Ribulose-phoshate binding barrel 215 469 IPR011060 -
Lan7g0763 473 TIGRFAM pyrF: orotidine 5'-phosphate decarboxylase 243 461 IPR014732 GO:0004590|GO:0044205
Lan7g0763 473 CDD OMP_decarboxylase_like 243 460 - -
Lan7g0763 473 Gene3D - 5 211 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0763 Lan-Chr7 6648984 6653036 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0661 2 12007233 12010521 Lan7g0763 7 6648984 6653036 PCT
Lan7g0763 7 6648984 6653036 Lan2g0661 2 12007233 12010521 PCT