Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0734 ATGGATGTTGTAGCAGTAGACGAAGGGGAAAACACTGCTTCGGAAAATGTTTTAAATGAAAAAGACCAGAAACAAGTTATGATTGTAAACTTGGGTGAAAGACAAGTAAATAATCAGGATGATAATGCATATATGAAACCACAACTGGGCATGCTGTTTGAATCTGAAGATGCTGCAAAAACATTTTATTATGCATATGCAAGGCATGTAGGATTTAGCATCCATGTCGGTCAATTCAGTCGTACTAAGCCTGATGGTCCAATTATAAGTTGGGACTTTGCATGTTCTAGAGAGGTATTGAAAAGGAAGAATGTAGTAAGTTGCAATGCAATGCTTAGGATAGAGAGAAAAGATGCAAACTGGACAGTGACAAAGTTTGTTGAGGACCATAGTCATTCCCTGGCTTCCGCAAGTAAGGTGCACCACCTTCGACCCCGTAGGCACTTTGCAGGTGCTACAAGGAATGTTATGGAGACATTTGATGCTAGTAATGATATGTATGCTTCCATGGATGACATTCCTTTAGAACGAATTGGTAATGCTAGGAGTTCTTCTCCAGCAGAAAAATGTCACCCAACCCGAAACAACGGACCTTTTACCTGTGTAGGATATTCTCAAAAGAGAACACTTGGAAGAGATGCTCACACTCTTCTGAATTATTTTCAGAAGATGCAAGCAGAAAACTCTGGCTTCTATTATGCAATACAGCTTGATGATGAGAACCGCATGACAAACGTATTCTGGGCTGATGCAAGGTCGAGAACAGCTTATAATTACTTTGGTGATGCCGTAATTTTTGACACGATGTATAGACCAAATCATTATCAGGTCCCATTTGCTCCCTTTACAGGAGTCAATCATCACGGTCAGCTGGTTTTATTTGGTTGTGCATTAGTTTTGGACGAATCTGAGTCATCCTTTACTTGGCTGTTCAGGACATGGCTATCTGCTATGAATAATCGACCACCTGCTTCTATAACCACCGACCAAGATCGAGCCATACAAGTAGCTGTTACCCAGGTGTTTCCAGAAACTAGGCACCGTATTTGTAAGTGGCACATTTTAAGAGAGGGTCAAGAACGTTTGGCTCATATTTACCTTGCTCATCCTTCATTCTATGGGGAGCTATATAGCTGCATCAGTTTCTCTGAGAGTATAGAAGATTTCGAATCTACGTGGAAGTCTCTCTTAGATAAATATGACCTCCAAAAAAATGATTGGCTTCAGGCAGTGTATAATGCTCGCAAACAATGGGCCCCTGTTTACTTTCATGGTACTTTCTTTGCTTCACTTACTCCAAGTCATGGGATTAGCTCCTTTTTTGATGGCTATGTAAATCAACAGACATCCCTACCTTTATTTTTTAAGCAGTATGAAAGAGCTCTTGAACATTCATTGGAAAATGAAATAGAAGCAGATAACGACACCATTTGTACAACACCTGAATTGAAGACTCCATCACCAATGGAACAGCAGGCTGCAAATTTGTACACTAAGAAGATTTTTACAAAGTTTCAGGAGGAACTTGTGGAAACTTTTGTATATACTGCAAATAATGTTGAGGATGATGGCGTGGTCAGTAAATACAGGGTTGCAAAATATGAACACGATCACGAGGCATTCATGGTCACATTAGATATTTCTGAAATGAAGGCGAAATGCAGCTGTCAGATGTTTGAGTACTCAGGCATTCTTTGCCGTCATATATTGACTGTCTACACTGTTACAAACGTTCTCACTCTTCCATCGCACTACATTTTGAAACGATGGACAAGGAATGCGAAAACCAATTTTGGAACAGATGAAAGAATACCCGATCCACTTGGCATTGAAAGTCTCACCTTACGTTTTAATAGTTTATGTCGAGAAGCAATTAAGCTTGCAGAAGAAGGGGCAATAGCTGTAGAGACTTATAACACTGCAATGAATGCTTTAAGAGAGGTTGGTAAAAAGGTTACTGTCGTGAAGAAACATGTTGCAAAAGTCACACCTTCAAGCACTCAGGGTAATGGAAGCAGTCAGCAAGACAATGGCAAGATGAGTCCGTCAACTTCTGAAGTCATCCCATCATTATGGCCTTCGCAAGATTCAGTGACACAACACTTTAATCTTAATGATGTTGGCCTTCCTGTTACTGATTTGAATCATCCTACTATGGCTCCTATTTCCATTCACCGAGATGGTGGCCCTCTTGATAACACAGTTGTCCTTACTTGTTTCAAGTCTATGACTTGGGTTATAGAAAATACAAATTCAAACCCATCCAGTAAAGTCGCAGTGATCAACATGAAGCTGCAAGATTATGGCCAGAGTCCTTCTGGAGAGAGAGAAGTGCAATTCAGGCTGACAAGGGTCACTTTGGAGCCTATGTTGAGGTCTATGGCTCACATCAGTCAGCAGCTCGCTGTACCAGTCAATAGAGTTGCTCTTATCAATCTAAAGCTCCAGGATACAAAGACAAGTAGTGGGGAAACAGAGGTGAAATTCCAAGTTTCTAAAGATACACTAGGTTCCATGCTGAGATCTATGAACTACATCCGAGACCAGCTATAA 2553 0.4066 MDVVAVDEGENTASENVLNEKDQKQVMIVNLGERQVNNQDDNAYMKPQLGMLFESEDAAKTFYYAYARHVGFSIHVGQFSRTKPDGPIISWDFACSREVLKRKNVVSCNAMLRIERKDANWTVTKFVEDHSHSLASASKVHHLRPRRHFAGATRNVMETFDASNDMYASMDDIPLERIGNARSSSPAEKCHPTRNNGPFTCVGYSQKRTLGRDAHTLLNYFQKMQAENSGFYYAIQLDDENRMTNVFWADARSRTAYNYFGDAVIFDTMYRPNHYQVPFAPFTGVNHHGQLVLFGCALVLDESESSFTWLFRTWLSAMNNRPPASITTDQDRAIQVAVTQVFPETRHRICKWHILREGQERLAHIYLAHPSFYGELYSCISFSESIEDFESTWKSLLDKYDLQKNDWLQAVYNARKQWAPVYFHGTFFASLTPSHGISSFFDGYVNQQTSLPLFFKQYERALEHSLENEIEADNDTICTTPELKTPSPMEQQAANLYTKKIFTKFQEELVETFVYTANNVEDDGVVSKYRVAKYEHDHEAFMVTLDISEMKAKCSCQMFEYSGILCRHILTVYTVTNVLTLPSHYILKRWTRNAKTNFGTDERIPDPLGIESLTLRFNSLCREAIKLAEEGAIAVETYNTAMNALREVGKKVTVVKKHVAKVTPSSTQGNGSSQQDNGKMSPSTSEVIPSLWPSQDSVTQHFNLNDVGLPVTDLNHPTMAPISIHRDGGPLDNTVVLTCFKSMTWVIENTNSNPSSKVAVINMKLQDYGQSPSGEREVQFRLTRVTLEPMLRSMAHISQQLAVPVNRVALINLKLQDTKTSSGETEVKFQVSKDTLGSMLRSMNYIRDQL* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0734 850 ProSiteProfiles Zinc finger SWIM-type profile. 541 577 IPR007527 GO:0008270
Lan7g0734 850 SMART 26again6 552 579 IPR006564 GO:0008270
Lan7g0734 850 MobiDBLite consensus disorder prediction 660 690 - -
Lan7g0734 850 Pfam SWIM zinc finger 543 574 IPR007527 GO:0008270
Lan7g0734 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 794 IPR031052 GO:0006355
Lan7g0734 850 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 794 - -
Lan7g0734 850 Pfam MULE transposase domain 264 356 IPR018289 -
Lan7g0734 850 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0734 Lan-Chr7 6270947 6276450 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan7g0734 MULE 5.5e-28 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0734 7 6270947 6276450 Lan8g1286 8 19362680 19367802 LSH