Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0721 ATGTCTCCATCATTGAAATCAAAATCCAAGTCCAAGGAGAAGGCCTCTGCAAGGGCCAGGAAGGAACAACAGAAGTGTTCTCCAAAGACTTCTGTGACTACTAATCATGGGAGTGGCATTCCTACTACCACATACAATCCCATCTCTGGAACATTTCATACCTTAGAAACATTATTAGTTGCTTCTTCGGCTCCACTTCATGACAACAGCCATTTCCTAAAAATAGATGACACTGATGATCATTCTAGTAGTCCTCAAGGAACGGTGTCTGAGTGTGATTCATTTTCTAACAATGGAAGCTGCTCTGGTGAATCAGAAGACCATAAAGAGAAAGTAGCAAACATGCGTCTGGATACTATACCTGGTTGTGATAATGAGAAAAGGGAGAAGATCCGGCTGAAGAATGAGAGAAAGCACCAACGGCAAAGGGAAAGGAGAGCCCAGGAGTTGCATGACCGTTGCAGTGGCTATCTAATGTCAAGGAAGCTAGAAGCACTTTCCAAGCAGTTAGTAGCGATGGGGTTCTCTTCTGAGCGAGCAACATTGGCATTGATGTTAAATGATGGCAAATTGGAGGAATCAGTATCCTGGCTCTTCGAAGGAAATGAAGATGAATCACATACAAAGGATACTACTACCAATCTTCTAAGTGAAGGTAATTTGAAAATTGACATAAGTGAAGAGCTTGCGCAGTTATCTGCTATGGAGGTGAGGTACAATTGTTCAAAGCAAGAGGTTGAGAAAGTAGTTGTTGCCTGTGAAGGTGATATTCAGAAAGCAGAAAATACCTTGAAATCCCAGAAGCAGGAGTCTCCTGTGATTCAATCAAAGTCAGAAGATTCTGCTCGAAATAATAGCTTGGTGAGATCACAAGGGCTACCAACAGCTTCAGTTTCAATGCAGCAGAGAGGGAATGACAGTGACTTTTACCATTCCAAAGTAGGTGGTGGTGCTTCTATGCTCCCAGATCCTGAAAGCAAGAATCTACAGTCTTTACACTCAAATCATCAAATTGAACCGACAGATAAAAGATGGGGTGTTACTGGATCAAGCCCTTCTACTATGTTAATGATGCCACCATCCATGCAAGCACGGTCTCCATTTGCAAAAGTAGATGCCCAGCCTAGTGCCCTTTGGAATGAAGGGAGAATGATTCAACAAGGATTTGGAAGGGAGCGAGTAGTCATGATGCAGAATCCACAATTCACAAATGCCAAGCAAAATTCTGTGTCTTCTATAAATGCCTTACCTTCAGGGACAGAAGGTTGGCATGCAAATAATATTCTATCTGCTGAAAATACAAGGTCAAATGGGAGGTTACTACAAAATCGCGACATAGGAAGTGCAGGTACACAAAGTGTAGAGAAATTTTGTCAATCTCCTTATAATGAATATTCCAATGTCTTCGGGCCAGTAGACTCCTTATCATCCGGAGTGGGAGGTTTCTATAAGCCAATGCATGCATCATCACCATCGCCTTCACCTACAATCCATCCTCAGCATCAGGGTTCATGGAGTGCAAGAGCATCTTCACCAGCACTTACATTTCCACCATCCCTTGGACTTTTTTCTGGTCATCAGAATGCAGCAGACAGAACATTCAGCCCACATTTACACGTGGATTGGAACAATGGTGGCTTGATGCCAGAATTTGACTACACCAATATAGATTGGACTTTCTATACTTTAGATTGCCGACCATCTCCCGAATCAGGCGGATTGTTGTTAGGGATTTCATCATTGTTGAGAAACAGTTCTGGGAGTAAAATGATGGGCAGTTCTTCATACATGGCCGGATTACAAAATGGTGGCATGGCTAAGGAATCTTCAACCTCTGCTGGTTTGCGAGAGTGGACAACTCCTTTTGCTGGGAAGGACATATTCAGTGTTCCTAGGCAGTTTGTTACCTCTACTCCTCTGTAG 1923 0.4295 MSPSLKSKSKSKEKASARARKEQQKCSPKTSVTTNHGSGIPTTTYNPISGTFHTLETLLVASSAPLHDNSHFLKIDDTDDHSSSPQGTVSECDSFSNNGSCSGESEDHKEKVANMRLDTIPGCDNEKREKIRLKNERKHQRQRERRAQELHDRCSGYLMSRKLEALSKQLVAMGFSSERATLALMLNDGKLEESVSWLFEGNEDESHTKDTTTNLLSEGNLKIDISEELAQLSAMEVRYNCSKQEVEKVVVACEGDIQKAENTLKSQKQESPVIQSKSEDSARNNSLVRSQGLPTASVSMQQRGNDSDFYHSKVGGGASMLPDPESKNLQSLHSNHQIEPTDKRWGVTGSSPSTMLMMPPSMQARSPFAKVDAQPSALWNEGRMIQQGFGRERVVMMQNPQFTNAKQNSVSSINALPSGTEGWHANNILSAENTRSNGRLLQNRDIGSAGTQSVEKFCQSPYNEYSNVFGPVDSLSSGVGGFYKPMHASSPSPSPTIHPQHQGSWSARASSPALTFPPSLGLFSGHQNAADRTFSPHLHVDWNNGGLMPEFDYTNIDWTFYTLDCRPSPESGGLLLGISSLLRNSSGSKMMGSSSYMAGLQNGGMAKESSTSAGLREWTTPFAGKDIFSVPRQFVTSTPL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0721 640 PANTHER DOMAIN PROTEIN, PUTATIVE-RELATED 1 638 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 7 25 - -
Lan7g0721 640 SMART uba_6 225 266 IPR015940 -
Lan7g0721 640 SMART uba_6 163 200 IPR015940 -
Lan7g0721 640 MobiDBLite consensus disorder prediction 1 42 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 77 109 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 82 102 - -
Lan7g0721 640 Coils Coil 123 143 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 489 510 - -
Lan7g0721 640 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 161 201 IPR015940 -
Lan7g0721 640 MobiDBLite consensus disorder prediction 26 42 - -
Lan7g0721 640 Gene3D - 124 214 - -
Lan7g0721 640 SUPERFAMILY UBA-like 165 206 IPR009060 GO:0005515
Lan7g0721 640 Coils Coil 243 270 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 487 510 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 263 308 - -
Lan7g0721 640 MobiDBLite consensus disorder prediction 263 345 - -
Lan7g0721 640 PANTHER UBIQUITIN-ASSOCIATED/TRANSLATION ELONGATION FACTOR EF1B PROTEIN 1 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0721 Lan-Chr7 6132991 6136365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0721 7 440 EF-hand Containing Proteins AT5G12120 39.700 2.17e-78 259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0721 7 6132991 6136365 Lan13g0661 13 5630489 5634302 LSH