Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0707 ATGGCACATAAGCCAGGTTCCGTTCAAGATTTCGATGCACTGCGAGAATTGTTGAAGCCTCATATAGAGTCATTCGATTACATGTCTGATCAAGGTTTACAAATCATGTTCCAACACATTGCACCTGTTCAAGTCATCGATCCTTTCACCAGCACCAACCTTAGAATTTGGTTGGATCATCCGGTGCTGTATGCTCCACAGAAGGAACGTAATTCGAAGTTGCGGAAGGATACCTTATTTCCATTTGAATGTAGACAGGCAAAGGTTTCGTATACAGGTAAGTTCACTGCAGATGTTTGCTTTCAATATGGTGGCGGGGCTATTATAAGGGAGAATGTTGATTTTGGGCAGTTTCCCATAATGCTTCAGTCAAAGTTATGTAATTTGAAAGATGCTGATCCCAGGAAACTTGCGTCTTACAAGGAGGAAGCATCGGAAATGGGTGGTTACTTCATTTTGAATGGCCTTGAGAGAGTTGTTCGACTACTAATTTTGCCAAAACGGAATTATCCAATGAGTATGGTGCGGAGTTCATTTAGTGACCGGCGGGAAGGATATACTGATAAAGCAGTTGTAATAAGGTGTGTGAGAACAGATCAATCATCTGTGTCAATAAAACTGTATTACCTTAGTAATGGAAGTGCAAGACTAGGTTTCTGGATGAGAGGAAGGGAGTACTTGCTTCCTGTTGGCATTGTTTTGAAGGCCCTCATTGACACAACAGACCGTGAAATTTATGTAAATTTGACTAGCTGCTATAATGAGAAGTATGAAAAGGGAAAGGGTGTTGTTGGGACTCAGCTTGTTGGTGAAAGGGCAAAAATAATTTTAGACGAAGTTAGAAAATTGTCTCTCTTCACTCGTCTGCAATGTCTAGAATATATTGGAGAGCATTTCCAACCTATGATGGCTCAGTCTATTGTGAATGACAGCTTTTCAGTTGTGGCTGAGTCTGTTCTGAACAACTATTTATTTGTTCATCTGGATAAGAATTTTGACAAATTCAATCTTCTCATGTTAGTCACCTGCACTTGTTCTCTTCTTGTATGTGATTATTTTGAATATTTGCTCAAACTATTGTTACTTATAATTAAAAATCTCTTGTGGAGAATCTATATATTGTTTGCTACTTCGCTAAAATATAACCTTGTAATTGTCCTTTCCTTTCTTCCCTTTAGCTTTATGTTGCAGAAACTATTCTCACTTGTAGATCAGACATCAGTATCAGACAACCCTGATTCCTTGCAAAATCAGGAGGTTTTACTCCCAGGCCATCTTATTACGCTATATCTTAAGGAAAAACTGGAAGATTGGCTGCAAAAGGGAAAGAAGCTTCTGCAGGATGAGCTACAAAAGCAAAGCAAGACATTTAATTTCGGTGACATTATTCAAGTTAAGAAATTGATGGGTAAAAATCCATCAAGGCAAATCAGTGCAGCTGTTGAAAATATGTTGAAAACTGGAAGATTGGTTACACAAACAGGTCTAGACCTTCAGCAGAGGGCAGGCTATACAGTTATGGCCGAGCGACTAAACTTCTTACGGTTTATTTCACATTTTCGTTCCGTTCATCGTGGGGCCTCATTTGCTGGACTTCGCACTACAACAGTGCGGAAGCTGTTGCCCGAATCTTGGGGCTTTCTTTGCCCTGTGCACACACCTGATGGAGAGCCCTGTGGATTGTTGAACCACATGACTTGCACTTGTAAGATTACCTCATTCTTTGATTCTCAAGGAAACATCAAAAAGGATTATTCTGAAGTAAAGAAATCCATCCTCAAAGTTTTAATTGAGGTTGGGATGACACAGTCATTGCCAAAGCTAGTTCTTCCTGGCCCGCCTCAAGTTCTTACTGTTCTTTTAGATGGTTGTATTGTTGGTTGTATACCTTCAAGTCAAGTTGAGAAAGTTGTTGCTCACGTACGAGCATTTAAAGTGTCATCTTCTGAAGAGATTCCTGATGATCTGGAAGTGGGTTATGTTCCATTGAGCATGGGCGGAGCATATCCCGGTCTCTACCTGTTCACATCCCCTTCAAGATTTGTTCGGCCTGTGAGAAATATATCAATTCCTTCCGATGGTGACAAAAATATTGAACTTATTGGACCATTTGAACAGGTTTTTATGGAGATAAGATGTCCCGATGGTGGAGATGGTGGAAGAAAAAGTTCATTTCCTGCAACCCACGAGGAAATTCATCCAACAGGAATGCTTAGTGTTGTTGCTAATCTTACACCTTGGTCAGATCATAATCAGAGTCCAAGAAACATGTACCAGTGTCAGATGGCAAAACAAACTATGGCATTCTCTTCACAAACAATTCAACATCGTGCCGACCAGAAGCTATATCATCTTCAGACTCCTCAATCTCCCATTGTGCGCACAAGTGCATATACTAAGTATAGCATTGACGAATTTCCAACAGGAACGAATGCAATAGTTGCGGTTCTGTCATATACTGGATATGATATGGAGGATGCCATGATTTTAAATAAGTCAGCAGTGGAACGTGGAATGTTTCATGGACAAATATATCAGACCGAAACTATTGACTTGACTGACCAAGGCCGCAAGTCAGACCGATCTTCAAGAATGTTCAAAAAAAGTAATGTAGAGAAATTTGCTTGTCCCTCACTTGATTCAGATGGACTTCCACACGTCGGTCAGATCATACGACCGGATGAGCCTTATTGTAGCATTTTTAATGAAGTAACAAGTTCCACACAAAACTTAAAGAAAAAAGGTTCTGAACCTGCTTATGTTGACTATGTAGCTGTTGATGTAAAAAACAAGAAGCACCTTCAGAAGGTTAACATACGCTTTCGACATCCACGGAACCCAGTCATTGGTGATAAATTTAGTAGTAGACATGGACAAAAAGGTGTCTGCTCTCAGTTGTGGCCAGATATTGATATGCCATTTTCTGGAACTACTGGGATGCGCCCAGATCTCATTATCAATCCTCATGCATTTCCTTCCAGGATGACAATTGCAATGCTTTTGGAATCTGTGGCGGCTAAGGGAGGCAGCATACACGGAGAATTCGTAAATGCAACACCATTCCGTAATTCAGTGAAGAAAGAAAGTGAGGAGGCTGGGTCAAAGTCCGGCTCACTTGTTGATGAACTGGGTCTCAAATTAAAAGAAAAGGGATTCAACTATCATGGTCTGGAAGTCCTGTACAGTGGGGTCTATGGAACAGAACTAACATGTGAGATCTTTATTGGGCCTGTTTATTATCAGCGGCTGCGTCACATGGTTTCAGACAAATTTCAGGTTCGATCTACTGGAACAATAGATCAGGTCACCCGGCAGCCAATAAAAGGACGAAAGCGTGGTGGTGGAATTCGATTTGGAGAAATGGAACGTGACTCTCTACTTGCTCATGGAGCAGCATATCTTCTACATGATAGGTTGCATACCTGTTCTGATTATCACATTGCTGATGTATGTTCCCTATGTGGAAGCATGCTCAATACAACTTTCATCCAGCCACTAAAGCGGCCAGTACGAGAGATCGGTGGGCTACCCCCAGGAAGAGCTCCAAAAAAGGTCATGTGTCATGCTTGCCAAACAAGTAAGGGTATGGAGACGGTGGCTATGCCGTACGTATTCCGATATTTGGCAGCAGAGTTAGCAGCAATGAACATAAAAATGACTCTTAAGCTAAGTAATGGAGCTGGAGCCTAA 3690 0.4119 MAHKPGSVQDFDALRELLKPHIESFDYMSDQGLQIMFQHIAPVQVIDPFTSTNLRIWLDHPVLYAPQKERNSKLRKDTLFPFECRQAKVSYTGKFTADVCFQYGGGAIIRENVDFGQFPIMLQSKLCNLKDADPRKLASYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRSSFSDRREGYTDKAVVIRCVRTDQSSVSIKLYYLSNGSARLGFWMRGREYLLPVGIVLKALIDTTDREIYVNLTSCYNEKYEKGKGVVGTQLVGERAKIILDEVRKLSLFTRLQCLEYIGEHFQPMMAQSIVNDSFSVVAESVLNNYLFVHLDKNFDKFNLLMLVTCTCSLLVCDYFEYLLKLLLLIIKNLLWRIYILFATSLKYNLVIVLSFLPFSFMLQKLFSLVDQTSVSDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQKGKKLLQDELQKQSKTFNFGDIIQVKKLMGKNPSRQISAAVENMLKTGRLVTQTGLDLQQRAGYTVMAERLNFLRFISHFRSVHRGASFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCKITSFFDSQGNIKKDYSEVKKSILKVLIEVGMTQSLPKLVLPGPPQVLTVLLDGCIVGCIPSSQVEKVVAHVRAFKVSSSEEIPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSDGDKNIELIGPFEQVFMEIRCPDGGDGGRKSSFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHLQTPQSPIVRTSAYTKYSIDEFPTGTNAIVAVLSYTGYDMEDAMILNKSAVERGMFHGQIYQTETIDLTDQGRKSDRSSRMFKKSNVEKFACPSLDSDGLPHVGQIIRPDEPYCSIFNEVTSSTQNLKKKGSEPAYVDYVAVDVKNKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSIHGEFVNATPFRNSVKKESEEAGSKSGSLVDELGLKLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLNTTFIQPLKRPVREIGGLPPGRAPKKVMCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLSNGAGA* 1230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0707 1229 Gene3D RNA polymerase alpha subunit dimerisation domain 1099 1225 - -
Lan7g0707 1229 Gene3D RNA polymerase Rpb2, domain 2 170 351 IPR037034 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2 11 349 - -
Lan7g0707 1229 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA2 392 1221 - -
Lan7g0707 1229 Pfam RNA polymerase Rpb2, domain 3 507 571 IPR007645 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 ProSitePatterns RNA polymerases beta chain signature. 950 962 IPR007121 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 Pfam RNA polymerase I, Rpa2 specific domain 626 683 IPR009674 GO:0003899|GO:0005634|GO:0006351
Lan7g0707 1229 CDD RNA_pol_B_RPB2 17 1222 IPR015712 GO:0003899|GO:0006351|GO:0032549
Lan7g0707 1229 Pfam RNA polymerase Rpb2, domain 7 1114 1222 IPR007641 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 Gene3D - 10 169 - -
Lan7g0707 1229 Pfam RNA polymerase beta subunit 16 467 IPR007644 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 Gene3D - 742 1097 IPR037033 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 Gene3D - 401 604 - -
Lan7g0707 1229 Gene3D - 772 946 IPR014724 GO:0003899
Lan7g0707 1229 Pfam RNA polymerase Rpb2, domain 6 741 1112 IPR007120 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 8 1225 - -
Lan7g0707 1229 Pfam RNA polymerase Rpb2, domain 2 187 304 IPR007642 GO:0003677|GO:0003899|GO:0006351
Lan7g0707 1229 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 11 349 IPR015712 GO:0003899|GO:0006351|GO:0032549
Lan7g0707 1229 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 392 1221 IPR015712 GO:0003899|GO:0006351|GO:0032549
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0707 Lan-Chr7 5916313 5932763 Transposed