Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0689 ATGCTTGTTTATTTGTCATCATTGCAACTAAATTGGCTTCTTGAGTTGTTTGGTTTGGCTGAAAAGAAAGCAACAATTTCTGATGATAGCAGCAACATTAATCACCCTTGCCTCATATTTCTGTTCATACTCTTGATAATCCTGATTGGTATTGGCTTGTACTTCAATCACCTGGCAGAAAACACAGAATACAATAACAATAGCAGTGAGGATGAAGTTGACCAAAGCTTGAAAGAAGACCATTATTTTGATGGTGGTCAGCAGCTCCGTCACCGGAATGCCACACGCCGCGGCTTTGTCAGGAGATACGGTGCTTGTGCCTTGTGTGGCAATCTAAGCAGTAAAAGGTGCTCACGCTGCAAGGTTGCCAGATATTGCTCAGTGGAATGCCAAATTAGTCATTGGAGGTCAGGGCATAAACATGAATGCTTTGAAAGAGAGACTACAGCAGATCAAGCAAGGCCTATTCATGCCAAGAAATCTGAAGGGGAGAGTACCTCTAATGGAGTGAAATTGGCTTCAGATATAGGAGAAGTAGATGTGTCCAATGGCAGTGATTTCAACAACTTACATTGCAGCTGTGAAGTGTGTGGCAGCCCAAGTACAACTAAATGCACAAGATGCAAAACAGTCACATACTGCTCAACAAAGTGCTTGATTGAGGACTGGAGATGGCATAAAGTTAACTGCACTGCAGGGGAAGTAAATTCAACTCCAACAGAAAGATTTCATGGAGATGTTGAAGTGCTCAAGAATTCACGTGAAGAGGAAGAAAATGTTCATTCATCTGAAGGAACCACAAACTCTAAATCTCCAATTAAAGGATCAAAGAAGGATCCTACCAAGGAAGCCCAGGAACATGGAACTGCAAAAATGGGGCAAAGTGAGGACGAAGCAACAAAGTATCGGAATAGGATATTATTACTACAATCAGAGCGTGATCATTGGATTAAGCGAGCTAATTTTGCTAGAGAAAGATTTCACAGCCTCAAGAAAGAGTCTGAACACCGGTTGTTTGTTTTGAAGAGTGAAAAGGAATCAATATCGAATGCTGAGAAGAAGGCTAGCAATATGGTTCATAATTTACATGAGAGGCTACACAACATGCAGATTGCAGTGCAAAAATGCATGTCAGAGAAAAGAAAGCTAGAAGAGCATCTACAAATGGTAGAGAGTGATTGGGCTAAGGCGAATAATGAACTGCAAAAAGAGAAGAAACATGTTCAATGTTTAACGGTGGAGTGTGACAAGAGTTGTGAGAATGCACAGATTGCCAAAATAGCAGCTGAAGTGGTAAGACAAGAGCTTCAAGAGGAGCGTGAACGTGTCCAACGACTTAAAGAGAACGTTAGAATTGCTCAATCTAGAGCTTCTTTTGCTGAGGCAAAACTCAGTGACCTTCATAAAAAAATCAAATCGAAAGATTATAAGGCATGTGCTATATGCCTTACCAACGAAAAAGACTTGGCCTTTGGATGTGGGCACATGACTTGCAGAGACTGTGGATCAAAATTATCTAAGTGTCCTATATGCCGCGAGCATATCACAAGCCATATCAAGCTGTTTCCTGGGTGA 1575 0.4133 MLVYLSSLQLNWLLELFGLAEKKATISDDSSNINHPCLIFLFILLIILIGIGLYFNHLAENTEYNNNSSEDEVDQSLKEDHYFDGGQQLRHRNATRRGFVRRYGACALCGNLSSKRCSRCKVARYCSVECQISHWRSGHKHECFERETTADQARPIHAKKSEGESTSNGVKLASDIGEVDVSNGSDFNNLHCSCEVCGSPSTTKCTRCKTVTYCSTKCLIEDWRWHKVNCTAGEVNSTPTERFHGDVEVLKNSREEEENVHSSEGTTNSKSPIKGSKKDPTKEAQEHGTAKMGQSEDEATKYRNRILLLQSERDHWIKRANFARERFHSLKKESEHRLFVLKSEKESISNAEKKASNMVHNLHERLHNMQIAVQKCMSEKRKLEEHLQMVESDWAKANNELQKEKKHVQCLTVECDKSCENAQIAKIAAEVVRQELQEERERVQRLKENVRIAQSRASFAEAKLSDLHKKIKSKDYKACAICLTNEKDLAFGCGHMTCRDCGSKLSKCPICREHITSHIKLFPG* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0689 524 MobiDBLite consensus disorder prediction 275 297 - -
Lan7g0689 524 MobiDBLite consensus disorder prediction 252 297 - -
Lan7g0689 524 SUPERFAMILY HIT/MYND zinc finger-like 189 231 - -
Lan7g0689 524 Pfam Prokaryotic RING finger family 4 479 518 - -
Lan7g0689 524 ProSiteProfiles Zinc finger MYND-type profile. 106 143 IPR002893 -
Lan7g0689 524 PANTHER COPINE FAMILY PROTEIN 1 19 522 - -
Lan7g0689 524 Pfam MYND finger 194 230 IPR002893 -
Lan7g0689 524 Pfam MYND finger 106 143 IPR002893 -
Lan7g0689 524 Coils Coil 373 400 - -
Lan7g0689 524 ProSiteProfiles Zinc finger MYND-type profile. 194 230 IPR002893 -
Lan7g0689 524 PANTHER PROTEIN, PUTATIVE-RELATED 19 522 - -
Lan7g0689 524 ProSitePatterns Zinc finger MYND-type signature. 106 143 IPR002893 -
Lan7g0689 524 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 462 523 IPR013083 -
Lan7g0689 524 Coils Coil 419 463 - -
Lan7g0689 524 SUPERFAMILY Tropomyosin 257 475 - -
Lan7g0689 524 Gene3D - 182 234 - -
Lan7g0689 524 Gene3D - 92 149 - -
Lan7g0689 524 SUPERFAMILY HIT/MYND zinc finger-like 101 144 - -
Lan7g0689 524 ProSiteProfiles Zinc finger RING-type profile. 479 512 IPR001841 -
Lan7g0689 524 SMART ring_2 479 511 IPR001841 -
Lan7g0689 524 ProSitePatterns Zinc finger C2H2 type domain signature. 498 518 IPR013087 -
Lan7g0689 524 SUPERFAMILY RING/U-box 478 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0689 Lan-Chr7 5764892 5770202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0689 194 242 Miscellaneous Gene Families AT4G31670 47.059 8.88e-06 46.6