Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0681 ATGCTTTTATTCATTCATATATTTCTCACTCTATTCTCCATTTCCCCAAAACCAAAAACTCTCCACCATTATAACAACCTTGACATGGCTGTTGAGGCTCGCCATCTAAATCTCTTTTCTTCTCAACTCATACCCAACAGAGAAATTATGATGAATCCTATGGATGCAAACATGAACCACTACCACAATAACCACTCCTCGGTGCTTCCGCTGTCGGGAACCACTACAACCACCGTGTCGGAGACACTTTTCCACCCGGCGTTACCGTACAATTCCTTAATCGCCGATTCGTTTCCTCCTCAGAAAACCATAACCGCTATGAAATCTGATGTCAGCACTCACAACAACAATGTTCATGTATCAAGAAAACGCTCTATAGACTCCATCAATTATGCTCATATCTCTTATAATAAGAATCGTGCTACTAATTTCTCGTTTCTCGGTGAAGACATGTCCCTACAAATCCATCACCAACAACTCGACCTCGATAACATCGTTTCTCAACACATGGAGAAAGTGAGAATAGAATTGGAAGAGAAGAGGAAGAGAGAAGCAAGGACATTGATGAATGCGATCGAAGTTGGAATAACGAAGAGACTGAAAACAAAAGATGAAGAGATAGATAAGATTGAGAAATTGAACTATGCTCTTCAAGAAAGGATCAAGTCTCTGTGCATGGAAAACCAGATATGGCGAGATTTGGCACAAACAAACGAGGCAACCGCAAATGCTCTCCGAACAAATCTAATGCAAGTCCTATCTCAGGCAAGGGAAAATCCCGTAGAATACGGCGGAGCCACCGTGGAAGCGGCGGAGTCTTGTTGTGGAAGCAACGATGAAAATGAAGGGTGGCGCATGGTAGCAGGGGGTGCGCAGGATAAGGAAGAAGAACGAGTTGCGAGTACGAGGAGTAGAGTAATGAATAATGAGAATGGGAGATTGTGCAGGAACTGTGGGAAAGAGGAATCGTGCGTACTTATTTTGCCATGTAGGCACTTGTGCCTATGTACTGTTTGTGGCTCTACCCTTCACACTTGTCCTATTTGTAATTCCTTCAAAAATGCTAGCCTCCATGTTAATCTCACCTAA 1089 0.4307 MLLFIHIFLTLFSISPKPKTLHHYNNLDMAVEARHLNLFSSQLIPNREIMMNPMDANMNHYHNNHSSVLPLSGTTTTTVSETLFHPALPYNSLIADSFPPQKTITAMKSDVSTHNNNVHVSRKRSIDSINYAHISYNKNRATNFSFLGEDMSLQIHHQQLDLDNIVSQHMEKVRIELEEKRKREARTLMNAIEVGITKRLKTKDEEIDKIEKLNYALQERIKSLCMENQIWRDLAQTNEATANALRTNLMQVLSQARENPVEYGGATVEAAESCCGSNDENEGWRMVAGGAQDKEEERVASTRSRVMNNENGRLCRNCGKEESCVLILPCRHLCLCTVCGSTLHTCPICNSFKNASLHVNLT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0681 362 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 29 361 IPR017066 -
Lan7g0681 362 Coils Coil 200 220 - -
Lan7g0681 362 ProSiteProfiles Zinc finger RING-type profile. 315 350 IPR001841 -
Lan7g0681 362 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 29 361 - -
Lan7g0681 362 Pfam Zinc finger, C3HC4 type (RING finger) 313 351 - -
Lan7g0681 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 289 360 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0681 Lan-Chr7 5693953 5695371 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0681 303 351 Miscellaneous Gene Families AT4G39050 34.694 4.03e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0681 7 5693953 5695371 Lan13g0630 13 5280208 5281689 LSH
Lan19g0089 19 710484 711815 Lan7g0681 7 5693953 5695371 PCT
Lan9g0211 9 2606345 2608390 Lan7g0681 7 5693953 5695371 PCT
Lan7g0681 7 5693953 5695371 Lan19g0089 19 710484 711815 PCT
Lan7g0681 7 5693953 5695371 Lan9g0211 9 2606345 2608390 PCT