Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0662 ATGGCAGAAGAAATCGTAGACGCAAATTCCTCTCATAACCTGTTCACACGCCTGGTAGAACGCACGCTCTTTCGTCGTCCTCCTCTCCCAAGCAAAAGACACGATTATGAAGAATGCTGCTACGAGGTTATGGAGACTCTCGGAGAAGGCGGTTTCGGCCGTGTTTATAAGTGCAAACATATGAGAACCGGTGAAATCGTCGCCATTAAGCAGATCGATTTTCGACACGATAGGAATGCCGTTCCATCTTTCCTCATCAGAGAAGTCTCGCTCCTTCGAGAACTCAAACATGACAACATTGTCCGTTTGTTGAATGTGTCGAGCAAGGAAACATATGTTAGCCTCGTTTTTGAGCTTCTTGATGAAGATCTTGGTCGCTATATCAGGCGTAACCGTGGCGTTAAAGATCCTCGGATTAGAAAGAGCTTTATGCAGCAAATACTCACTGGTCTGGCACACTGTCACGCGCAGAAGATTCTGCACAGAGATCTGAAACCCACGAATTTGCTGATCGATAATTCTAAAATGATGATCAAGATTGCTGATTTTGGTTTGGCTAGAGAATTTGGAGGAGACATGCTACTAACTAGACGTCCTGCAACTCGCTATTACAGGGCACCTGAAATTTTGCTTGACTCCCGTGAATATTCAACTGCAGTTGATTTGTGGTCTGTTGGCTGTATATTTGGTGAGATGGTAACTGGACGGCCTATATTCGGAACTGGTAATTGTTTTGATGAATTAGAGGCGATTTTCAGAATGTTAGGGACCCCCACTGAGGATACGTGGCCGCAAGTCTCAAAATTTACTCACCTTCAATCCTATGCCAAATTTCATCCAATGGACCTGTCAACTATTTTTGCTGATCTTGAACCACAAGGCCTTCATCTTCTTAAAATGTTGCTTTGCCCGGATCCAAAAAGAAGGCCTTCTGTCGAAGGTGCTCTGAAGCATGCTTACTTTAATGATCTCCCTGAGCATCGTAGAAGGTATCGTCTTATACTGCTCTCTTATGTTATCTTAAATCACTGCCTGCGTCTAACCATCTTCGAATAA 1056 0.4394 MAEEIVDANSSHNLFTRLVERTLFRRPPLPSKRHDYEECCYEVMETLGEGGFGRVYKCKHMRTGEIVAIKQIDFRHDRNAVPSFLIREVSLLRELKHDNIVRLLNVSSKETYVSLVFELLDEDLGRYIRRNRGVKDPRIRKSFMQQILTGLAHCHAQKILHRDLKPTNLLIDNSKMMIKIADFGLAREFGGDMLLTRRPATRYYRAPEILLDSREYSTAVDLWSVGCIFGEMVTGRPIFGTGNCFDELEAIFRMLGTPTEDTWPQVSKFTHLQSYAKFHPMDLSTIFADLEPQGLHLLKMLLCPDPKRRPSVEGALKHAYFNDLPEHRRRYRLILLSYVILNHCLRLTIFE* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0662 351 CDD STKc_CDK_like 41 321 - -
Lan7g0662 351 SMART serkin_6 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0662 351 SUPERFAMILY Protein kinase-like (PK-like) 40 325 IPR011009 -
Lan7g0662 351 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Lan7g0662 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lan7g0662 351 Gene3D Phosphorylase Kinase; domain 1 36 120 - -
Lan7g0662 351 Gene3D Transferase(Phosphotransferase) domain 1 122 333 - -
Lan7g0662 351 PANTHER CELL DIVISION PROTEIN KINASE 31 327 - -
Lan7g0662 351 ProSiteProfiles Protein kinase domain profile. 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan7g0662 351 PANTHER CYCLIN-DEPENDENT KINASE 31 327 - -
Lan7g0662 351 Pfam Protein kinase domain 41 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0662 Lan-Chr7 5437085 5440407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0662 41 324 Core Cell Cycle Gene Families AT3G48750 46.690 2.03e-86 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Lan7g0662 Pkinase 5.7e-73 CL0016