Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan7g0641 | ATGAGAAGACTCCCCTTTACGATACTAAAACAATCTTGTTCCCGTCGCACCCACCACCAATTCATCAATGCCGCCGCACAACTTCCAATTCAAAAACCCTTCTCCGCCGCTCCCTCCTCCTTCCCTCGCCCAGAACTCGTAGAACCCTTCTGCGACATCTCCGACGTCGTCGTTTCATCTCCCCACAACCTCCAACCTTCCCCATGGCTCACCCAAATCCTCTCCCTCCTCGACGGTTCTCCTTCCATGGAGTCCAACCTCACCTCCTTCTGCCGCCAATTCCTCATCACTCTCTCCCCTTCCTTCGTCTCCCACACTCTCCTCTCAATCCACAACAACCCTCACACCGCTTCCCGCTTCTTCCACTGGGCCCGCGACCAGCATAATTACTCTCATACCCTCGACTGCTACGTGTCACTCATCCACGTCGTCCTGTCGTCACCTGAACCTGACTTAACTACATTCCGTGACGTTTTCGCTGAACTGAAACGACGGCGTTTTGCTATGACGGTTACTGCGGTTAACTCTTTGATTAGGAGTTTTGGTAGTGTTGGTTTGGTGGAGGAGTTGTTGTGGGTGTGGCGAGAAATGAAGGAGAATGGGATCGAGCCGAGTTTGTACAGTTATAATTTTTTGCTCAATGGGTTGGTTAATTCAGCTATGGTGGAATCCGCTGAGAGGGTTTTCGAAGTGATGAAGGATGGGAAGGTGAAGCCGGATGTCGTAAGTTACAATACTATGATCAAAGGATATTGTAAGGTTGGGAAGACGAGGAAGGCGTTGGAGGAGGTTAGGGGTATGGAGACGTTGGGTTTGGAGCCGGATAAGATTAGTTATTTGACAGTTATGCAGGCATGTTATTCCGAAGGGGATGTGGATTTTTGTTTGAGTCTTTACCATGAGATGGGAGAGAAAGGGTTGGAGGTTCCGAGTCACGGGTATAGTTTGGTGATAGGTGGGCTTTGTAAGCAGGGGAAGGTTGTCGAGGCTTTTACTGTGTTTGAAGATATGATACGGAGTGGTTGTAGGGCTAATAAGGTTGTGTATACTGCTCTGATTGATTCGTATGCCAAGAGTGGGAATGTGGATGGGGCAATGAGGTTGTTTGAGAGGATGAAAGTGGATGGGATTGAGCCAGACGAGGTTACGTATGGAGCTATTGTTAATGGGTTGTGTAAGAGTGGGAGAGTAGAGGAAGCTATGGGTTATTTGGAGTTCTGTAGGGTTAATTGTGTCACAATTAATGCAGTGCTTTACTCGAGTTTGATTGATGGTCTTGGGAAGGCTGGGAGAGTGGACGAAGCTGAGAGGCTGTTTGATGAGATGGCTGAGAAGGGATGTCCGCAGGATTCATACTGCTACAATGTGCTTATTGATGGATTGGCTAAGCGTGGGAGGATTAATGAAGCTATGATGCTTTTTAAGCGGATGGAGAGAGATGGCTGCGAGCAGACGGTTTATACTTATACAATACTGATCAGTGAGCTTTTCAAGGAGCATAGGAATGAGGAGGCACTGAAACTGTGGGACATGATGATTGATAAGGGTATCACACCAAATGTTGCCTCTTTTAGAGCTCTTTCAATAGGACTATGTCTTTCCGGTAAGGTAGCGAGAGCTTGCAAGATTTTGGATGAGCTAGCTCCCATGGGTATCCTTATGGAAACGGCTTATGAAGACATGATTAATGTGCTGTGTAAGGCTGGTCGCGTGAAGGAAGCCTGCAAATTAGCTGATGGAATTGTGGATAGGGGCAGAGAAATACCTGGAAAGATCCGTACTTTGATGATTAATGCCCTGAGGAAAGCTGGTAAAGCAGATTTGGCAGTCAAGTTGATGCATAGCAAGATTGGTATTGGATATGACCGATATCGTAGTGTTAAAAAGCGAGTCAAGTTCCAAACCCTTGTTGACACTTGA | 1920 | 0.4714 | MRRLPFTILKQSCSRRTHHQFINAAAQLPIQKPFSAAPSSFPRPELVEPFCDISDVVVSSPHNLQPSPWLTQILSLLDGSPSMESNLTSFCRQFLITLSPSFVSHTLLSIHNNPHTASRFFHWARDQHNYSHTLDCYVSLIHVVLSSPEPDLTTFRDVFAELKRRRFAMTVTAVNSLIRSFGSVGLVEELLWVWREMKENGIEPSLYSYNFLLNGLVNSAMVESAERVFEVMKDGKVKPDVVSYNTMIKGYCKVGKTRKALEEVRGMETLGLEPDKISYLTVMQACYSEGDVDFCLSLYHEMGEKGLEVPSHGYSLVIGGLCKQGKVVEAFTVFEDMIRSGCRANKVVYTALIDSYAKSGNVDGAMRLFERMKVDGIEPDEVTYGAIVNGLCKSGRVEEAMGYLEFCRVNCVTINAVLYSSLIDGLGKAGRVDEAERLFDEMAEKGCPQDSYCYNVLIDGLAKRGRINEAMMLFKRMERDGCEQTVYTYTILISELFKEHRNEEALKLWDMMIDKGITPNVASFRALSIGLCLSGKVARACKILDELAPMGILMETAYEDMINVLCKAGRVKEACKLADGIVDRGREIPGKIRTLMINALRKAGKADLAVKLMHSKIGIGYDRYRSVKKRVKFQTLVDT* | 640 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan7g0641 | 639 | Pfam | PPR repeat family | 415 | 463 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat family | 345 | 393 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat family | 490 | 532 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat family | 208 | 253 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 205 | 239 | IPR002885 | - | |
| Lan7g0641 | 639 | Gene3D | Tetratricopeptide repeat domain | 339 | 407 | IPR011990 | GO:0005515 | |
| Lan7g0641 | 639 | Gene3D | Tetratricopeptide repeat domain | 266 | 338 | IPR011990 | GO:0005515 | |
| Lan7g0641 | 639 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MITOCHONDRIAL | 30 | 638 | - | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 314 | 345 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 382 | 404 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 452 | 483 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 207 | 241 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 242 | 275 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 277 | 308 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 417 | 450 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 487 | 521 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 347 | 381 | IPR002885 | - | |
| Lan7g0641 | 639 | TIGRFAM | PPR: pentatricopeptide repeat domain | 175 | 205 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 345 | 379 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 275 | 309 | IPR002885 | - | |
| Lan7g0641 | 639 | PANTHER | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN PET309, MITOCHONDRIAL | 30 | 638 | - | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 380 | 414 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 170 | 204 | IPR002885 | - | |
| Lan7g0641 | 639 | SUPERFAMILY | HCP-like | 278 | 484 | - | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 485 | 519 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 415 | 449 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 240 | 274 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat | 561 | 582 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat | 174 | 202 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat | 277 | 307 | IPR002885 | - | |
| Lan7g0641 | 639 | Pfam | PPR repeat | 314 | 342 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 450 | 484 | IPR002885 | - | |
| Lan7g0641 | 639 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 310 | 344 | IPR002885 | - | |
| Lan7g0641 | 639 | Gene3D | Tetratricopeptide repeat domain | 500 | 632 | IPR011990 | GO:0005515 | |
| Lan7g0641 | 639 | Gene3D | Tetratricopeptide repeat domain | 408 | 499 | IPR011990 | GO:0005515 | |
| Lan7g0641 | 639 | Gene3D | Tetratricopeptide repeat domain | 106 | 265 | IPR011990 | GO:0005515 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan7g0641 | 107 | 620 | Glycosyltransferase | AT1G05670 | 25.775 | 1.46e-42 | 162 |