Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0640 ATGATGAAGATTCAATGTAACGCATGTGAAGCTGCAGAAGCTAAGGTCCTGTGCTGTGCAGATGAAGCAGCACTGTGCTGGGAATGTGATGAGAAGGTTCATGCAGCTAACAAGCTGGCTAGTAAGCACCAGAGAGTCCCTCTTTCTACTTCGGCTTCTCAAGTGCCCAAGTGTGACATATGTCAGGATACAGTTGGCTATTTCTTCTGTCTGGAGGATCGGGCTTTACTATGCAGGAATTGTGATTTAGTAATACACACAGTAAATGCCCATGTCTCTGCACATCAAAGGTTTCTGCTTACTGGTGTAAGAGTAGGCCTTGAAGCTACAAAGCCTGGTGCTTCCTCTTCTCTTGCAAAATCACATTCTGAGGAAAAAATGTCAAATACAAAATCTTCTTCCATCTCAGGAAATGTTTCCCCAATGCCTCAGTCATTCAATCACAATGAAGTGTTACCCATCCAAGTTGGAAGAGTTGGGGAGTTTCCACAACCTAAAGTGTCTTATAGTGGTGATTCTACAGTTGGAAACGTCTCACACTGGCCCATTGATGAATTTCTATGGTTAAGTGAATTCGGTCAGAATTATAATTGCATGGGTGGATCATCGAAGGATGACAGTGGTAAACGTTGGGATTCTGATTCTTCTCTTGTAAGATTGAATGAAGTGGAAATGGATAATGATGATTTCTCGGGGCATGTTCCAGATTCGTGCTGGACAGTCCCACAGATTCCTTCTCCTCCTACAGCTTCAGGGTTATATTGGCCGAAAGATTCTCAGTATACATCCGATGCTATGTTTGTTCCTGACATATGCTTTTCTGACATGCAACAGCCCGACAGTACTCGGAATAATTTTATTTCCCCAAAACGAAGGCAACTGTAA 885 0.4294 MMKIQCNACEAAEAKVLCCADEAALCWECDEKVHAANKLASKHQRVPLSTSASQVPKCDICQDTVGYFFCLEDRALLCRNCDLVIHTVNAHVSAHQRFLLTGVRVGLEATKPGASSSLAKSHSEEKMSNTKSSSISGNVSPMPQSFNHNEVLPIQVGRVGEFPQPKVSYSGDSTVGNVSHWPIDEFLWLSEFGQNYNCMGGSSKDDSGKRWDSDSSLVRLNEVEMDNDDFSGHVPDSCWTVPQIPSPPTASGLYWPKDSQYTSDAMFVPDICFSDMQQPDSTRNNFISPKRRQL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0640 294 Gene3D Classic Zinc Finger 2 97 - -
Lan7g0640 294 PANTHER B-BOX ZINC FINGER PROTEIN 18 2 292 - -
Lan7g0640 294 Pfam B-box zinc finger 54 91 IPR000315 GO:0008270
Lan7g0640 294 Pfam B-box zinc finger 4 48 IPR000315 GO:0008270
Lan7g0640 294 SMART bboxneu5 1 48 IPR000315 GO:0008270
Lan7g0640 294 SMART bboxneu5 53 100 IPR000315 GO:0008270
Lan7g0640 294 MobiDBLite consensus disorder prediction 113 138 - -
Lan7g0640 294 CDD Bbox1_BBX-like 6 48 - -
Lan7g0640 294 PANTHER B-BOX ZINC FINGER PROTEIN 22 2 292 - -
Lan7g0640 294 CDD Bbox1_BBX-like 57 100 - -
Lan7g0640 294 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Lan7g0640 294 MobiDBLite consensus disorder prediction 114 138 - -
Lan7g0640 294 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0640 Lan-Chr7 5107590 5110322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0640 2 294 C2C2-CO-like Transcription Factor Family AT1G78600 45.706 1.77e-84 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Lan7g0640 zf-B_box 1.1e-06 No_clan