Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0244 ATGGTTTTCTCCTCTATTCCACTCTATGTAGATCCTCCAAATTGGCATCAGCAACCAAATCAGCACCATCATCACCAAGCAAATGGAAATGATAGCCCTCAGCTGCTTCCACCTTTGCCTCCACAAGGAGGAGGTGGTGTTGTGGGGTCAATCAGGCCGGGCTCGATGGCGGATCGAGCCCGGCTAGCTAAGCTGCTTCCTCCAGAAACAGCTCTAAAGTGTCCTCGCTGCAATTCCACCAACACTAAATTCTGCTACTTCAACAACTACAGCCTCACGCAGCCGCGCCACTACTGCAAGACTTGTAGGCGTTACTGGACAAAAGGGGGTAATCTCAGAAGCGTTCCCGTTGGTGGAGGATGCCGTAAGAACAAGAAGAGCAAAAGGAGTCGCTCCAAATCTCCTCCATCATCTGAGAAACAAACCCTATCTAGTTCCACAAGTGCAATCCCCTCTGGTGAAAACACTCATGAGCTAATTGGTCAGATGACTCAACCACCTAACCTACCTTTCATGGCCTCTCTACAGAACCAGATGAACCGTTATGGTGTTGCAAACATGGCTGGTCTCAGTTTGCAAGGACAAACGGATCATATGGGCTTTCAAATTGGTAGTGGTAATTCAGCTGGTGCTGGTGGAGTGGAGCAGTGGCGGTTACAGCAGTTTCCTTTCTTGAATGGTTTTGAGTCAACCTCAGTTGCATCATACCCTTTTCAGAATGAGAGTGTTGAAGCAAATTCTGGGTTTATTGAAGATATAGGTGCAAGTTCTAGGGTTAATAATCAGCAGTCACCAGTTAAAATGGAAGAGAATAGAGCTCTGAATTTGTTAAGATCATCTATGAATAATACTGTCTCAGAAAATAACCAATACTATTCATGGAGTGACTTATCAGGTCTTCCTTCTTCTTCTTCCACTAGTCATCTCTTGTGA 933 0.4566 MVFSSIPLYVDPPNWHQQPNQHHHHQANGNDSPQLLPPLPPQGGGGVVGSIRPGSMADRARLAKLLPPETALKCPRCNSTNTKFCYFNNYSLTQPRHYCKTCRRYWTKGGNLRSVPVGGGCRKNKKSKRSRSKSPPSSEKQTLSSSTSAIPSGENTHELIGQMTQPPNLPFMASLQNQMNRYGVANMAGLSLQGQTDHMGFQIGSGNSAGAGGVEQWRLQQFPFLNGFESTSVASYPFQNESVEANSGFIEDIGASSRVNNQQSPVKMEENRALNLLRSSMNNTVSENNQYYSWSDLSGLPSSSSTSHLL* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0244 310 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 9 305 - -
Lan7g0244 310 MobiDBLite consensus disorder prediction 13 47 - -
Lan7g0244 310 ProSiteProfiles Zinc finger Dof-type profile. 72 126 IPR003851 GO:0003677|GO:0006355
Lan7g0244 310 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 305 IPR045174 GO:0003700|GO:0006355
Lan7g0244 310 ProSitePatterns Zinc finger Dof-type signature. 74 110 IPR003851 GO:0003677|GO:0006355
Lan7g0244 310 MobiDBLite consensus disorder prediction 136 166 - -
Lan7g0244 310 MobiDBLite consensus disorder prediction 14 33 - -
Lan7g0244 310 MobiDBLite consensus disorder prediction 116 166 - -
Lan7g0244 310 Pfam Dof domain, zinc finger 71 126 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0244 Lan-Chr7 1529068 1530781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan7g0244 1 303 C2C2-Dof Transcription Factor Family AT2G37590 36.932 2.94e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan7g0244 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0244 - - gmx:100816635 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0244 7 1529068 1530781 Lan7g0244 7 1529068 1530781 ECH
Lan7g0244 7 1529068 1530781 Lan8g1717 8 23991919 23993653 LSH
Lan6g1972 6 30638870 30640530 Lan7g0244 7 1529068 1530781 PCT
Lan7g0244 7 1529068 1530781 Lan6g1972 6 30638870 30640530 PCT