Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1829 ATGAATAATAAAACAAGGTTGAGTTTCACAACATTCTTATCTCTCTGTTTCATAGCTTTCCCTATTTTACTCACTTTCACTCTCATTCACCATAACTCTTTCATCTTTCAACCCTTTCCCAATATCATAGATAAACATCAACATCGAATCTCACAACACCCACCTCCTACTCCAACAACAACAACAACCTCTTCACATATTATTGGTACAAAGAATCACTCATTTGCAAATCAGGAGAATGATTCACATGTATCTTCTACTACCATTGCTAATCATAAATTCCTTGATGGACTTCTACCTTCCACATTTGATGAAGGATCAGGATCATGCCTAAGTAGGTATCACTCTTACTTATACCGCAAACCTTCTCCTCATAAACCCACTGCATATTTTATATCCAAGCTCCGAAACTACGAACATCTTCATACACTTTGTGGACCTCATACCCACTCCTACAACAAAATCATGACAAAGGACGCAAAATTTACGAAAAATGATGCCAGTACTAAGTGCAAATACCTTGTGTGGACAGCTTCCAATGGCTTAGGGAACAGGATGCTAACTTTGGCTGCTGTGTTCCTTTATGCTATACTCACCGATCGTGTTCTACTTGTTAAATTTGGGGATGATATGCTTGGTCTCTTTTGCGAGCCATTTCCTCATTCCTCCTGGTTATTGCCGAGGGATTTTCCTTATTGGAAGGATCGTAAACATATCCAAACATATGAAAATGTGCTAATGAAACACGGGGGGAACAACTCAAAGGAGCTTTTACCATCATTCCTGATTCTTAATCTACAACACACTCATGATGGTCATAATAACTTTTTCCATTGTGATTATAGTCAAGAACTTCTGCACAAAGTTCCTGTGCTGATTTTGTCGTCGGATCAGTATTTTGTCCCTTCTCTTTTTATGATTCCATCGTTCAGACAAGATCTAAGCAAAATGTTCCCTGAAAAAGACACAGTTTTTCACCATATTGGACGTTACCTTTTTCATCCGTCAAATGAGGCATGGGAACTTATTACCAAGTTTCATGAGACACACTTTGCCAAGGCAAATGAGAGGATTGGCGTGCAGATTAGAGTATTCAACACTCATAAAGCACCACATCAAACTATAATCAATGAAATTATAGCCTGCAGTGTTAAGCATAAGCTGCTCCCTGAATTAGACTTGCAAAAGCCAGCAGAAGCAGCTTCTGTTTTGAAGAACCAGACCTCAAAAGCTGTTCTTGTAGCGTCTTTGTTCTCAGAATATGGTGATAAGCTGAGGGCTTTGTATCTGAGGAATACAACTGTGACCAATGAAGTGGTAAGAGTTTATCAGCCAAGTCATGAAGAGAGACAAAAGTCAAGTAATGGAATGCACAATATTAAGGCATGGACTGAAATATATCTGCTCAGTTTGTGTGATTCATTGATTACTAGCCGCAAGTCGACTTTTGGATATGTTGCCCAAAGTCTTGGAGGTTTGAAACCATTGATTCTACAGAGGGCATTTGGTGAAACCATCCCAAATCCACCTTGTCAGAGAGCCAGGTCCATGGAGCCTTGTTTCCATTATCCTCCCAAATATGACTGTAGTAGGTCCAATACAACAGTTGATTTTACTTCCCTTTTTCATGACATGATGCATTGTGAAGATGTAAGTAGTGGGTTGAGAATGGTTAATATTAAACACTAG 1689 0.3908 MNNKTRLSFTTFLSLCFIAFPILLTFTLIHHNSFIFQPFPNIIDKHQHRISQHPPPTPTTTTTSSHIIGTKNHSFANQENDSHVSSTTIANHKFLDGLLPSTFDEGSGSCLSRYHSYLYRKPSPHKPTAYFISKLRNYEHLHTLCGPHTHSYNKIMTKDAKFTKNDASTKCKYLVWTASNGLGNRMLTLAAVFLYAILTDRVLLVKFGDDMLGLFCEPFPHSSWLLPRDFPYWKDRKHIQTYENVLMKHGGNNSKELLPSFLILNLQHTHDGHNNFFHCDYSQELLHKVPVLILSSDQYFVPSLFMIPSFRQDLSKMFPEKDTVFHHIGRYLFHPSNEAWELITKFHETHFAKANERIGVQIRVFNTHKAPHQTIINEIIACSVKHKLLPELDLQKPAEAASVLKNQTSKAVLVASLFSEYGDKLRALYLRNTTVTNEVVRVYQPSHEERQKSSNGMHNIKAWTEIYLLSLCDSLITSRKSTFGYVAQSLGGLKPLILQRAFGETIPNPPCQRARSMEPCFHYPPKYDCSRSNTTVDFTSLFHDMMHCEDVSSGLRMVNIKH* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1829 562 Pfam Xyloglucan fucosyltransferase 88 529 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lan6g1829 562 Gene3D - 340 499 - -
Lan6g1829 562 Gene3D - 168 217 - -
Lan6g1829 562 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 561 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lan6g1829 562 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1829 Lan-Chr6 29559167 29561379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1829 7 558 Xyloglucan Fucosyltransferase1 AT2G03220 45.405 4.78e-161 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1829 K13681 - gmx:100799776 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1829 6 29559167 29561379 Lan5g0495 5 10380835 10382872 PCT
Lan6g1829 6 29559167 29561379 Lan9g0593 9 8661277 8664187 PCT
Lan6g1829 6 29559167 29561379 Lan2g0594 2 9291518 9294220 PCT
Lan5g0495 5 10380835 10382872 Lan6g1829 6 29559167 29561379 PCT
Lan9g0593 9 8661277 8664187 Lan6g1829 6 29559167 29561379 PCT
Lan2g0594 2 9291518 9294220 Lan6g1829 6 29559167 29561379 PCT