Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g1381 ATGCCATCGATGGATTCCGGCAGCGCAACCAAGCCTCCGTCTAACCATGTTTCCGGAGGTAGACTTCCGCCGCAGGGACAAGAGTACCTCCAGTGCCCACGTTGTGACTCCACCAATACCAAGTTTTGCTACTACAATAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTATTGGACCCAAGGTGGCACCCTCCGCGACATCCCTGTTGGCGGTGGCAGCCGCAAGAACGCTAAACGCTCCCGCACACTTCACAACTACAATGTTTCTAATTCCACTTCCTCTTCTTCTACTATGACTTCTTCTGCAATGGTGGTGGTGCCAAATCAAGCAGGACCCATGTCCATGTCCATAGAAAATTTGAATGTGAACGTGTGTAGTGGTGAGATTAGGAGTTTCTCTTCGTTGTTGAATAACACACAAGGTTCTTCTGCTTCTGGATTTCTGGCTTTGGGAGGGTTTGGTCTTGGACTTGAAGAGATAGAGTTTAGGGTTGGAAGAGCGGGTTGGAGTTTTCCAGGAACGGTAGCAGGTGCTGCTAACTTTAGTGGCGATGTTGCGGCTTCTGGTGGCGGTGCGTGGCAGTTGGAAGGTGGCGAAGCTAGTTATGTTGGTGGTAGAGACTATTTCTCTTGGCCTGGACTAGCAATTTCAACACCTGAAAATGGTCTGAAATGA 693 0.5036 MPSMDSGSATKPPSNHVSGGRLPPQGQEYLQCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLRDIPVGGGSRKNAKRSRTLHNYNVSNSTSSSSTMTSSAMVVVPNQAGPMSMSIENLNVNVCSGEIRSFSSLLNNTQGSSASGFLALGGFGLGLEEIEFRVGRAGWSFPGTVAGAANFSGDVAASGGGAWQLEGGEASYVGGRDYFSWPGLAISTPENGLK* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g1381 230 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 9 227 - -
Lan6g1381 230 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Lan6g1381 230 MobiDBLite consensus disorder prediction 1 25 - -
Lan6g1381 230 MobiDBLite consensus disorder prediction 1 15 - -
Lan6g1381 230 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Lan6g1381 230 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 227 IPR045174 GO:0003700|GO:0006355
Lan6g1381 230 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g1381 Lan-Chr6 16421804 16422673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g1381 1 230 C2C2-Dof Transcription Factor Family AT3G50410 41.085 1.66e-46 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan6g1381 zf-Dof 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g1381 - - gmx:778095 231.106