Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0732 ATGTTAAGTAACTGCGACAAAATGGGACACATCCCTCCACCAACAACTAACGAATGGACACAGACTCATAACATAGATGATCATCAGAAGAACTCCATGGCTTCTTCAACTGGTATTAGGGCTATGGAAAAACCAGGTCAAGAGCTTCTTCAACAACAACAACAAGCACTAAACTGCCCACGTTGTGACTCATCAAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCACAGCCACGCCACTTCTGCAAAGCCTGCAAACGATACTGGACAAGAGGTGGAACTCTCAGAAACGTTCCTGTTGGTGGTGGCTGCAGAAAAAACAAGCGTGTGAAGAGACCAAATATTGATACCACTCCTTCTTCTCCTTCTTCCAATTCAAACCCTCCTAATAATACTATTATTACTTCAACAACCTCAAATCATGTCAACCCTTTGTTTTATGGGTTACCACCTAGTCGTAATTCTTGTGATGTCATGAGTGCTCTTCAATTCCCAAGGTTTAGTTCTGGGTATGATCTTCAGCCTCAGATGAACAACCTTGGATTAGTTTTTTCATCTGAGGTTATGTCTAGTGATAATAATGGTTACAGAAATGGGTTTATTTCAAGTAACAACAACACTTTTGTTTCTACATATAGTTCCATCTTTGGTTCTTCAACTTCTACACCCTCTACTCCAGCTATGGCTCCCCTACTACTGCAACAGAAGTTCATGAATGGTGAAATGAAAGAGGTTCCGAACAATTTCCAGGGCTTAGAAGGTTTGCAAATGGAGGGTAATAACTGTGAGGGAGGGGTGATGGGTTCTAAAGAAGTAGTGAAAGTTGAAGGACAAAACAGGTTGGATTGGAATATTAATGGTGGTGCTTCTTGCCAAAACCAGATGGATCAGCATATGGATTTGTTGTCTCATGATCCTTTACTTTATTGGAACACAGCAACTGCTATGGGTACTTGGACTGACCAACGTAACCTAATATAA 987 0.4103 MLSNCDKMGHIPPPTTNEWTQTHNIDDHQKNSMASSTGIRAMEKPGQELLQQQQQALNCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPNIDTTPSSPSSNSNPPNNTIITSTTSNHVNPLFYGLPPSRNSCDVMSALQFPRFSSGYDLQPQMNNLGLVFSSEVMSSDNNGYRNGFISSNNNTFVSTYSSIFGSSTSTPSTPAMAPLLLQQKFMNGEMKEVPNNFQGLEGLQMEGNNCEGGVMGSKEVVKVEGQNRLDWNINGGASCQNQMDQHMDLLSHDPLLYWNTATAMGTWTDQRNLI* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0732 328 Pfam Dof domain, zinc finger 55 111 IPR003851 GO:0003677|GO:0006355
Lan6g0732 328 ProSitePatterns Zinc finger Dof-type signature. 59 95 IPR003851 GO:0003677|GO:0006355
Lan6g0732 328 MobiDBLite consensus disorder prediction 1 20 - -
Lan6g0732 328 MobiDBLite consensus disorder prediction 102 139 - -
Lan6g0732 328 ProSiteProfiles Zinc finger Dof-type profile. 57 111 IPR003851 GO:0003677|GO:0006355
Lan6g0732 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 2 319 IPR045174 GO:0003700|GO:0006355
Lan6g0732 328 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 2 319 - -
Lan6g0732 328 MobiDBLite consensus disorder prediction 116 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0732 Lan-Chr6 6651362 6653351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0732 1 159 C2C2-Dof Transcription Factor Family AT1G28310 51.807 6.61e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan6g0732 zf-Dof 2.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0732 - - qlo:115990486 298.901