Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0731 ATGGAGAGAGAAGTAGAACAAGGTAGAGGAGGTGGAGAAATTGGAGGAGACCGGAATCAACAACCTCAGCCTCCACCACCACCACAACAACAGCAGCAGCAATGTCCACGCTGCGAGTCTCTGAACACCAAGTTCTGCTATTACAACAATTATAGCCTGTCACAGCCTCGGTTCTTCTGCAAAGCATGTAAAAGGTACTGGACACAAGGTGGAATCTTGAGGAACATACCTATTGGTGGCGCTGCCCGAAAAAGGAAGCGCTCCAAAGGTTCGTCATCATCATCATCCACCGCCATGAGTTCTTCTTCTGGACAGCAACCGCAACTGCAACCGCAACCAGCTACACAAGAAGTGGTCCAACAACTCCAAAACCAGCCAAATATGACAACTTTGGTGAGGCCTATTCCACCTAGGATGGTTCAGTCAACTAATCCTTATTACCAAGGTGGCAGTATTGGTAGTGGATATTTGTCTTCTCTGGCTGCGGTTCATTCGCTGAACCCACAACCACAGCCAATGAATCAGTCTCTAAATGTTGGAGTTGGTGATGTTGTGGCTTCTACTAATTTAGGTCTTCTCTCTAGCTTCCATGACCGTGCCTCTCTTGGCTTACAGCACCAACACCCTGACCAAATTCACGCACCGCGATTCTATCAAATTGGTAACAACAGGATGGTAGAACCTCTGCTTCGCCAAGAACATGGTTTCAATGTTCCACCAAACATGGCTAGTAACGCTACTGCTTATGGCACAGATCACTGGCTCCAAAGATTCATCAATAATACTAATCATAGGGCACCTGATACTTCTTTGTGGAGTACTGTCAGCACCACTTTTTCCATTAGCAGTAACACTCGGAACAACACCAGAGGAGGTGGCTCTTCTTCTTTGATGCCAAATCATTGGTCTAATTTTCCAGGGAATGGCTCTCCTTATCAGTAA 942 0.465 MEREVEQGRGGGEIGGDRNQQPQPPPPPQQQQQQCPRCESLNTKFCYYNNYSLSQPRFFCKACKRYWTQGGILRNIPIGGAARKRKRSKGSSSSSSTAMSSSSGQQPQLQPQPATQEVVQQLQNQPNMTTLVRPIPPRMVQSTNPYYQGGSIGSGYLSSLAAVHSLNPQPQPMNQSLNVGVGDVVASTNLGLLSSFHDRASLGLQHQHPDQIHAPRFYQIGNNRMVEPLLRQEHGFNVPPNMASNATAYGTDHWLQRFINNTNHRAPDTSLWSTVSTTFSISSNTRNNTRGGGSSSLMPNHWSNFPGNGSPYQ* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0731 313 MobiDBLite consensus disorder prediction 1 35 - -
Lan6g0731 313 ProSiteProfiles Zinc finger Dof-type profile. 33 87 IPR003851 GO:0003677|GO:0006355
Lan6g0731 313 ProSitePatterns Zinc finger Dof-type signature. 35 71 IPR003851 GO:0003677|GO:0006355
Lan6g0731 313 MobiDBLite consensus disorder prediction 78 117 - -
Lan6g0731 313 MobiDBLite consensus disorder prediction 282 313 - -
Lan6g0731 313 MobiDBLite consensus disorder prediction 91 117 - -
Lan6g0731 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 14 311 IPR045174 GO:0003700|GO:0006355
Lan6g0731 313 Pfam Dof domain, zinc finger 31 87 IPR003851 GO:0003677|GO:0006355
Lan6g0731 313 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 14 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0731 Lan-Chr6 6640774 6642559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0731 26 98 C2C2-Dof Transcription Factor Family AT3G45610 69.863 8.33e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan6g0731 zf-Dof 2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0731 - - lang:109349998 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0731 6 6640774 6642559 Lan19g0386 19 4862678 4863973 PCT
Lan6g0731 6 6640774 6642559 Lan16g0150 16 1179220 1180200 PCT
Lan19g0386 19 4862678 4863973 Lan6g0731 6 6640774 6642559 PCT
Lan16g0150 16 1179220 1180200 Lan6g0731 6 6640774 6642559 PCT