Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0588 ATGGCTAACAACAATTCCTCAAATGAGTCGCCTTCATCTAATTCCGGCAACGCTTCAACTCCACCGTCGCCACCTTCTGATGATATTTCAGAACCTCCCCAAAGTTCGCCGCCATCAAAGTCTCATCCTCCGCCGTCACAACCGCCGCCTTCTCCGACGAATTATTCGCCGCCACCGTCTCCGTCTCAATCTCCGCCGCCATCCCCACCTAAATCTCTTCCACCTTCCTTGCCTCCGCAACCGGAATCATCGCCGCCTCCACCTCCTGCGCCGAAATCATCACCACCACCTCCTAATAACTCACAACCTCCTAAGAATGCACAGCCACCAACAACTTCACCTCCTCCCCCCTCTTCACCACCCCCGACATCACCATCAACAACACCGCCACCACCCTCCACACCTTCAACACCACCATCACCGTCAAATAGTGGTTCTCCATCTCCGAGCCCTGCTCAGCAGTCACCTCCACCGCAAACTCAAATCCCTCCTCCTCCACCTAAGAACACACCTTCTCCTCCAACTCTACCAGCACCTGGTTCAAATGTTACTCCGGCTAGGCCGCCACCACATGGTTCGGTACCGAACCCTCCACCTGTTTCCCCCTCCGGCCACCATCCAAAAGCAAGTGATACTCCTTCAAGTAGCCCTTCCCGGCCAAATTCGAATGGTTCCGGTGAGAATAACACAGGAGAAATTGTTGGCCTTACCCTTGGCGTGGTTGCAGTTCTTGTCATTCTTGGTCTACTTCTCTTCTTAATATTCAGGCGCAACAAAAACCGATCGAATCTTTATGCTATTCCACCCCCTAATAAATTTCATCATAGGAACGGAGGTGCAGATGTGTGTTACTATGTTGAGGAGCAAGCTGTTAGGAACGGTCCACAGGATGGGTTTTATAATACACAACTTACATCTCCTGGAACCAACCCTTCAGACCCAGCATCAGTGCCTATGGGTCAGATGCTTTTTAATTATGACACAATTTCGGAAATAACTGATGGATTTTCTAGTCAGAATGTGATAGGGGAAGGGGGATTCGGGTGTGTTTACAAGGCTTTCATGCCAGACGGTAGAATTGGAGCAGTTAAGCTACTGAATACTGGTGGTGGGCAGGGAGAACGGGAGTTCAGGGCAGAGGTGGATATTATCAGCCGTATTCATCATCGACATTTGGTATCATTAATTGGTTATTGCATAAGCGAGCAGCAAAGAGTGCTTATCTATGAGTTTGTTCCTAATGGCAATCTCAGTCACCACATGCATGGAAGTGGTGTGCCAGTTTTGAGTTGGGAAAAGAGGATAAAGATAGCTTTTGGTTCAGCAAGGGGCTTGGCATATCTGCACGAGGGCTGCAACCCAAAGATTATCCACAGAGACATCAAGTCAGCAAACATACTATTGGATGATGCTTTTGAGGCACAAGTTGCAGACTTTGGACTTGCCAGACTAACCGATGATGTTAATACCCATGTATCAACTAGGGTGATGGGAACCTTCGGGTACATGGCCCCCGAATATGCAACTAGTGGAAAATTAACAGATAGATCAGATGTTTTCTCATTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTCGATCCAATGCAACCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCCCGTCCTCTTCTCCTTCATGCAATTCAGACAGGTGACTTTAGTGAACTAGTGGACCCAAGGCTTGAAGGGCAATACGTCAACAGTGAAATGTCCAGAATGATTGAGGCAGCGGCAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGTTAGCAAGAGCCTTAGAAGCTGGAGATCAGTCTGATTTATCTAATGGGGTGAAATATGGTCAGAGCACTGTTTATGACTCTGGCCAATACAACAAAGACATTATGAGATTCAGAAGGATGGCCAATGGCAGTTTTGGTGAATCTGATTTAGATATGTATAGTAAAGATTATAGTTCAGAAGAGATGCCTGGACCCCAATATCAGTGGAGGCGAAATATTTCGAGTACTGATTCAGAAGCTAAAGCTTACTATAGCCTTAATAACAGTGCTGCTGAGAACAGGTCTTGA 2100 0.4757 MANNNSSNESPSSNSGNASTPPSPPSDDISEPPQSSPPSKSHPPPSQPPPSPTNYSPPPSPSQSPPPSPPKSLPPSLPPQPESSPPPPPAPKSSPPPPNNSQPPKNAQPPTTSPPPPSSPPPTSPSTTPPPPSTPSTPPSPSNSGSPSPSPAQQSPPPQTQIPPPPPKNTPSPPTLPAPGSNVTPARPPPHGSVPNPPPVSPSGHHPKASDTPSSSPSRPNSNGSGENNTGEIVGLTLGVVAVLVILGLLLFLIFRRNKNRSNLYAIPPPNKFHHRNGGADVCYYVEEQAVRNGPQDGFYNTQLTSPGTNPSDPASVPMGQMLFNYDTISEITDGFSSQNVIGEGGFGCVYKAFMPDGRIGAVKLLNTGGGQGEREFRAEVDIISRIHHRHLVSLIGYCISEQQRVLIYEFVPNGNLSHHMHGSGVPVLSWEKRIKIAFGSARGLAYLHEGCNPKIIHRDIKSANILLDDAFEAQVADFGLARLTDDVNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDPMQPVGEESLVEWARPLLLHAIQTGDFSELVDPRLEGQYVNSEMSRMIEAAAACVRHSAPKRPRMVQLARALEAGDQSDLSNGVKYGQSTVYDSGQYNKDIMRFRRMANGSFGESDLDMYSKDYSSEEMPGPQYQWRRNISSTDSEAKAYYSLNNSAAENRS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0588 699 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 40 671 - -
Lan6g0588 699 MobiDBLite consensus disorder prediction 1 228 - -
Lan6g0588 699 Gene3D Transferase(Phosphotransferase) domain 1 412 627 - -
Lan6g0588 699 PANTHER RECEPTOR-LIKE KINASE 40 671 - -
Lan6g0588 699 MobiDBLite consensus disorder prediction 25 204 - -
Lan6g0588 699 Gene3D Phosphorylase Kinase; domain 1 308 411 - -
Lan6g0588 699 MobiDBLite consensus disorder prediction 207 228 - -
Lan6g0588 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Lan6g0588 699 MobiDBLite consensus disorder prediction 1 24 - -
Lan6g0588 699 Pfam Protein tyrosine and serine/threonine kinase 339 608 IPR001245 GO:0004672|GO:0006468
Lan6g0588 699 SUPERFAMILY Protein kinase-like (PK-like) 309 609 IPR011009 -
Lan6g0588 699 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0588 699 ProSiteProfiles Protein kinase domain profile. 336 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan6g0588 699 CDD STKc_IRAK 342 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0588 Lan-Chr6 5160895 5170687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0588 189 665 Trihelix Transcription Factor Family AT1G70460 57.086 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan6g0588 PK_Tyr_Ser-Thr 5.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0588 - - lja:Lj2g3v1414850.1 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0687 18 12127870 12135187 Lan6g0588 6 5160895 5170687 LSH