Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan6g0135 ATGCCTTCGACTGATTCTGGCGGCAACCACCGCCCATCGAAGCCACAAAACCATGGAACTCAGCCACCGGAACAAGAGAACCTCCCATGTCCACGGTGTGACTCCATCAACACCAAGTTCTGCTACTACAACAACTATAATCTCTCACAGCCACGTCACTTCTGCAAGTCATGCCGCCGCTACTGGACTCATGGCGGCACCCTCCGCGACATCCCCGTCGGCGGTGGAACCCGCAGGAACGCAAAGCGCTCCCGAACACTTTCATCATCAACAACCGTGATGGCTTCTTCAACTCCTGTTCAGGATCATACAACATTGGTGCCCATTCCTCAGGGAACAAAGGTTCAGGCAAATCCTGTAAGTGTATGTGGAAGTGGGGGCTTTACTTCGTTGCTGAACAATGGGCTTGGGCTTGAAGATGTGGGTTTTGGTATGGGTAGAGTAGGATGGGCTTTTCCGGGGATGGTGGATGGTGGCTGCATTGGTGGTGGTGTTGCTGTTGCGGGTTCAGGAGTTGGGAACACGTGGCAGCAGTTTGAAAGTGGTGGTGAAGATGGGTTTGTGAGTGGAGACTGTTTCACCTGGCCTGGGTTAGCGATTTCAACACCTGGTTACGGTCTCAAATGA 627 0.5295 MPSTDSGGNHRPSKPQNHGTQPPEQENLPCPRCDSINTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDIPVGGGTRRNAKRSRTLSSSTTVMASSTPVQDHTTLVPIPQGTKVQANPVSVCGSGGFTSLLNNGLGLEDVGFGMGRVGWAFPGMVDGGCIGGGVAVAGSGVGNTWQQFESGGEDGFVSGDCFTWPGLAISTPGYGLK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan6g0135 208 MobiDBLite consensus disorder prediction 1 24 - -
Lan6g0135 208 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Lan6g0135 208 MobiDBLite consensus disorder prediction 81 104 - -
Lan6g0135 208 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Lan6g0135 208 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Lan6g0135 208 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 205 - -
Lan6g0135 208 MobiDBLite consensus disorder prediction 73 104 - -
Lan6g0135 208 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 205 IPR045174 GO:0003700|GO:0006355
Lan6g0135 208 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan6g0135 Lan-Chr6 965846 967046 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan6g0135 1 208 C2C2-Dof Transcription Factor Family AT3G50410 44.231 6.52e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lan6g0135 zf-Dof 4.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan6g0135 - - gmx:778095 245.358