Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0734 ATGAAGTATGTGTTGGTAACAGGTGGTGTTGTTAGTGGACTTGGGAAAGGTGTCACTGCTAGCAGTATTGGGGTTCTACTCAAGACATGTGGTCTTAGAGTTACTTCTATCAAGATTGATCCCTATCTGAACACTGATGCAGGGACTATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTCTTAGATGACGGCGGAGAGGTTGACCTTGACCTTGGGAACTATGAACGTTTCTTGGACATCAAATTAACCTGTGATAATAATATCACTACCGGAAAGATATATCAGTCTGTTATTGAGAAGGAGAGAAGAGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATAACAGATGCCATCCAAGACTGGATCGAGCGTGTTGCAAGGATACCGGTTGATGGCAAAGAAGGGCCAGCTGATGTTTGTGTCATTGAATTGGGTGGAACTATCGGGGATATTGAGTCTATGCCTTTTATTGAAGCACTTGGCCAATTTTCATACCGTGTAGGCCATGGCAACTTCTGTTTGATTCATGTCAGCCTGGTTCCTGTACTCAATGTTGTTGGTGAACAGAAAACAAAGCCAACTCAGCACAGTGTTCGACAACTTAGAGGATTAGGTTTGACCCCGAATCTTCTTGCTTGTCGAAGCACAAAGGAACTCGATGACAATGTTAAGGCAAAACTTGCTCAATTTTGTCATGTGCCGTTGTCAAACATAGTTACTCTTCATGACGTTCCGAATATTTGGCACATTCCTTTGCTATTAAAAGACCAGAAAGCGCATGAAGCTATCCTGAACGCTCTAAACCTGTTAAGTATTACTATAGAGCCTAATTTGAAGGAATGGACCACCAGGACTAAAGTTTATGTCGACTTTCATGAAAATGTTAGAATTGCGATGGTAGGAAAATACACGGGCCTTTCTGATGCATATCTTTCTGTTCTGAAGGCACTTTTACATGCCGCTGTTGCACGTAATCGTAAACTTATTGTGGACTGGGTTGCTGCTGAAGATCTTGAAGATGCTACTTCTAAACAGGATCCTAATGCATATAAAGCCGCTTGGGGACTTCTGAAGGGTGCTCATGGGGTTCTAGTTCCCGGAGGTTTTGGTGATAGAGGAGTGGCAGGGAAAATTCTTGCTGCAAAGTATGCTCGAGAGAATAATGTTCCATATCTTGGCATTTGCTTGGGAATGCAAATTGCTGTCATTGAGTTTGCACGATCTGTCCTCGGTATGGATGATACTACCAGCACCGAATTTGATCCCGAGGCCAAGAACCCTTGTGTCATATTCATGCCAGAGGGTTCAAAGACTCATATGGGAGGAACCATGCGTCTGGGTTCAAGGAGAACTTACTTCCAAGTTGCTGACTGCAAATCTGCGAAATTGTATGGTAATGTAGGCTTTGTTGATGAGCGACATCGGCATCGATATGAGGTTAACCCTGACATGATATCACAACTAGAGAGTGCTGGTCTATCATTTGTTGGCAAAGATGAAACTGGGAGTCGTATGGAGATAATTGAACTGCCTAGCCATCCTTTTTTTATTGGCGCGCAATTTCACCCTGAGTTCAAGTCCAGACCGGGGAAACCTTCTCCCCTCTTCTCAGGATTAATTGCAGCAGCATGTGAACTGGATAGGACAGCTACGTCACCAAGCCGTGGCCACTCCAAGTTAACTAATGGAATACACAACGGACAGTCACCAAAACTGAAATCACACCAAAATGGAAATGGCTTCAAAACAACCAATGGTTCCTTAAACGGTATATACACGAATGGCAATGGCAACAGCAACGGCGTGCACCTTTAG 1824 0.4386 MKYVLVTGGVVSGLGKGVTASSIGVLLKTCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDIKLTCDNNITTGKIYQSVIEKERRGDYLGKTVQVVPHITDAIQDWIERVARIPVDGKEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGHGNFCLIHVSLVPVLNVVGEQKTKPTQHSVRQLRGLGLTPNLLACRSTKELDDNVKAKLAQFCHVPLSNIVTLHDVPNIWHIPLLLKDQKAHEAILNALNLLSITIEPNLKEWTTRTKVYVDFHENVRIAMVGKYTGLSDAYLSVLKALLHAAVARNRKLIVDWVAAEDLEDATSKQDPNAYKAAWGLLKGAHGVLVPGGFGDRGVAGKILAAKYARENNVPYLGICLGMQIAVIEFARSVLGMDDTTSTEFDPEAKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVADCKSAKLYGNVGFVDERHRHRYEVNPDMISQLESAGLSFVGKDETGSRMEIIELPSHPFFIGAQFHPEFKSRPGKPSPLFSGLIAAACELDRTATSPSRGHSKLTNGIHNGQSPKLKSHQNGNGFKTTNGSLNGIYTNGNGNSNGVHL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0734 607 MobiDBLite consensus disorder prediction 553 607 - -
Lan5g0734 607 Gene3D - 1 291 IPR027417 -
Lan5g0734 607 SUPERFAMILY Class I glutamine amidotransferase-like 297 549 IPR029062 -
Lan5g0734 607 CDD CTPS_N 2 267 IPR017456 GO:0003883|GO:0006221
Lan5g0734 607 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Lan5g0734 607 PANTHER CTP SYNTHASE 1 574 IPR004468 GO:0003883|GO:0006221
Lan5g0734 607 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Lan5g0734 607 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Lan5g0734 607 Gene3D - 294 557 IPR029062 -
Lan5g0734 607 PANTHER CTP SYNTHASE 1 574 - -
Lan5g0734 607 TIGRFAM PyrG: CTP synthase 1 545 IPR004468 GO:0003883|GO:0006221
Lan5g0734 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Lan5g0734 607 MobiDBLite consensus disorder prediction 554 607 - -
Lan5g0734 607 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Lan5g0734 607 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0734 Lan-Chr5 18698387 18705083 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0052 19 399326 406525 Lan5g0734 5 18698387 18705083 LSH
Lan13g0640 13 5381926 5388563 Lan5g0734 5 18698387 18705083 PCT