Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0496 ATGGACAAGATGGGGTTGAGTTCCAATAAACTCAAAACATTGTTTGTTGTATGCTGCATAGTTTTTCCTTTTGCTCTCACTGCCACCTTAAAGTTCAAAAACTCAAGCATCACATTCTTTGAGGGGTTTTCTCAAAACAAGGTGTTGCAAAGGGAGATTCAAAATGATAGAGACCCTATTGAGGAAAGAACTACAGCTAGGGATAACACAGCATCAGAAATAGGATTGATAAATGCTCCATTAACAAGTTCATCAAATAGTTCAAGTTCGGATTCAATTCATGATGACCAAGAAAAACTACTTGATGGACTTTTGGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGATTGCAGTCTCACTTATACCGCAAAGTTTCTCCTCACAAACCTTCTCGATATCTGATATCGAAACTGCGGAATTACGAAGAACTTCATAGAAGGTGTGGACCTAATACTATAGCTTATAACAAAAGCATGGCATACATTGAAAATTCTAAGAACAACAATGGTGATGGTACAATGTGCAAATACCTTGTTTTTTCACCTGCTAATGGCTTAGGGAACAGAATAATTAGCATGGCTGCAACATTTCTATATGCTATACTCACAAACAGAGTTCTACTTGTAAGATTTGGTGAAGACATGCATGGCCTATTTTGTGAGCCATTTCTCAATTCAACTTGGACGTTACCAAACAACTCTCCTTTTTGGAATCAAGAACATGTTGAAACATATGACACCATTTTAGATAAGGACAAGGCCAACAATTCGAAACACGATTCGCCATCGGCTTTGTTTCTAAATCATCAATTCACCAAAGGGAATCCTGAGAAATTTTTCCATTGTGATCATATTCAAGATCTTCTAAGGAATGTCCCTTTGTTGATTTTGCAGACAGATCAATATTTTGTCCCTTCTTTGTTCATGATCCAATCTTTCAACTTGGAGATTAACAAAATGTTCCCACAAAAGGACACAGTTTTCTACCATTTGGCACACTACCTTTACCACCCTTCAAATGAAGCATGGAGACAAATCACGACATTCTATCAAACATACTTGGCGAAATTCGACGAGATAATCGGCATTCAGATAAGAGTTTTTAGACCTGATATCACATCAAATCAAGCAATTATAGACTTAGTTTTAAACTGCACCATAGAGAATAAACTTCTACCAAAATTAGTCACACAAAATTCAGTTTCTTATATTCAAAACCATACTAGAAAGGCAATTCTAGTAACATCTTTATCTCCAAACTATGGTGAGAATTTGAGGGCTATGTATCAAAATAAACAAAGTATTAGTGGAGAAGTAATTGAAGTTTATCAACCAAGTCATGAAGAGAAACAAAAGTTTGGTGATAACATGCATAATATGAAGGCATGGACAGAAATGTATTTACTAAGTTTATCTGATATATTGGTTACTTCATCTTTATCAACTTTTGGGTATGTGGCTCAAGGTTTTGGAGGATTGAAGCCTTGGATTCTTGTTAAACCACACAAGAAAAAGCCCAATTCTGCAGCATGTAAACAAGACTTTTCATCAGAGCCTTGTTTTCATTACCCTCCTATGCATGAGTGCAATGGAAAGTTCCAAAAACATTTTTCTTCTTCTTTCCCTTATTTGTGGGAATGCAAGGATAGTCATAGTGGAGTGAAGCTAATTAGTCGGCAAAGATCTGGTATGCTTAAAAGTCTATTGGAATTTGGAAGGAGTGACAAAGGTGTGGGATGA 1743 0.3626 MDKMGLSSNKLKTLFVVCCIVFPFALTATLKFKNSSITFFEGFSQNKVLQREIQNDRDPIEERTTARDNTASEIGLINAPLTSSSNSSSSDSIHDDQEKLLDGLLASGFDEASCISRLQSHLYRKVSPHKPSRYLISKLRNYEELHRRCGPNTIAYNKSMAYIENSKNNNGDGTMCKYLVFSPANGLGNRIISMAATFLYAILTNRVLLVRFGEDMHGLFCEPFLNSTWTLPNNSPFWNQEHVETYDTILDKDKANNSKHDSPSALFLNHQFTKGNPEKFFHCDHIQDLLRNVPLLILQTDQYFVPSLFMIQSFNLEINKMFPQKDTVFYHLAHYLYHPSNEAWRQITTFYQTYLAKFDEIIGIQIRVFRPDITSNQAIIDLVLNCTIENKLLPKLVTQNSVSYIQNHTRKAILVTSLSPNYGENLRAMYQNKQSISGEVIEVYQPSHEEKQKFGDNMHNMKAWTEMYLLSLSDILVTSSLSTFGYVAQGFGGLKPWILVKPHKKKPNSAACKQDFSSEPCFHYPPMHECNGKFQKHFSSSFPYLWECKDSHSGVKLISRQRSGMLKSLLEFGRSDKGVG* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0496 580 Gene3D - 174 263 - -
Lan5g0496 580 Gene3D - 342 506 - -
Lan5g0496 580 Pfam Xyloglucan fucosyltransferase 89 530 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lan5g0496 580 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 559 IPR004938 GO:0008107|GO:0016020|GO:0042546
Lan5g0496 580 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 8 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0496 Lan-Chr5 10384528 10387893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan5g0496 96 558 Xyloglucan Fucosyltransferase1 AT2G03220 48.511 1.96e-150 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0496 K13681 - gmx:100809919 656.751