Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan5g0473 | ATGGCGGAACTCGATCTATCGAAGAAAGTAGCCGATAGGTATCTGAAGCGCGAGGTTCTTGGTGAAGGTACCTATGGAGTCGTTTACAAAGCCATTGATACTGAGACAGGACAGACGGTTGCAATTAAGAAAATCCGTCTTGGCAAGCAGAAAGAAGGGGTGAATTTTACAGCTCTTAGAGAAATTAAACTCCTTAAAGAGCTTAAATCTCCACATATAATTGAGTTGATTGATGCCTTCCCACATAAAGGGAATTTGCATCTTGTGTTTGAATTCATGGAGACGGATCTCGAAGCTGTCATACGAGACCGAAATATTTTTCTTTCGCCAGGCGATATAAAATCTTTCCTTCAAATGACGCTAAAAGGTCTTGCATTTTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAATAACTTGTTGATAGGATCTAATGGACAGCTGAAACTTGCAGATTTCGGTTTAGCACGGATATTTGGAAGCCCAGACCGCAGGTTCACTCATCAGGTATTTGCTCGATGGTACAGAGCACCTGAGCTATTATTTGGTACCAAGCAGTATGGTTCAGGGGTTGATGTTTGGGCTGCAGCTTGTATATTTGCTGAACTGCTTCTTCGTCGACCCTTTCTGCAGGGTTCAAGTGATATTGATCAATTAGGAAAGATTTTTGCAGCACTTGGAACTCCATCACCTTCTCAGTGGCCGGATATGGTATACCTTCCTGATTATGTTGAATACCAATATGTTCCCGCCCCTCCTTTGCGCTCCTTATTTCCAGTGGCAAGTGATGATGCTTTAGATTTGTTGTCAAAAATGTTTACATATGATCCAAAAGTTAGAATTTCAGCACAGCAGGCATTAGAGCACAGGTACTTCACTTCTGCACCCCTGCCCACAGATCCAGATAAGCTTCCGAGACCTGCCCCTAAGAGAGAACCTAAGGCTTCAGATTTTGATTCACATGAGGGTCCTACTGTCCTGTCACCTCCGAGAAAGTCTAGGAGAGTGATGCCAGGGCGTGATGGGTTTGAAGGCAACTCTTTGCAAAGAGATAAGGTTGAGGACAATGTTGGTAATTCCAGACAGTCAGCTGGTGATAATACAGGCAAGAATGATCCAGCACCAATGTCACTAGATTTTTCTGTCTTCGGATTAAAGCCTCCAAATAGACCTACAATTAACAGTGCTGACAGGTCACATTTAAAAAGAAAATTAGATCTAGAATTCCAGCAGCCAGAATGA | 1248 | 0.4287 | MAELDLSKKVADRYLKREVLGEGTYGVVYKAIDTETGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKSPHIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPGDIKSFLQMTLKGLAFCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAALGTPSPSQWPDMVYLPDYVEYQYVPAPPLRSLFPVASDDALDLLSKMFTYDPKVRISAQQALEHRYFTSAPLPTDPDKLPRPAPKREPKASDFDSHEGPTVLSPPRKSRRVMPGRDGFEGNSLQRDKVEDNVGNSRQSAGDNTGKNDPAPMSLDFSVFGLKPPNRPTINSADRSHLKRKLDLEFQQPE* | 416 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan5g0473 | 415 | ProSitePatterns | Protein kinases ATP-binding region signature. | 20 | 44 | IPR017441 | GO:0005524 | |
| Lan5g0473 | 415 | CDD | STKc_CDK7 | 13 | 307 | IPR037770 | GO:0005675|GO:0008353|GO:0070985 | |
| Lan5g0473 | 415 | Pfam | Protein kinase domain | 16 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lan5g0473 | 415 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 132 | 144 | IPR008271 | GO:0004672|GO:0006468 | |
| Lan5g0473 | 415 | ProSiteProfiles | Protein kinase domain profile. | 14 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lan5g0473 | 415 | Gene3D | Phosphorylase Kinase; domain 1 | 4 | 94 | - | - | |
| Lan5g0473 | 415 | MobiDBLite | consensus disorder prediction | 306 | 321 | - | - | |
| Lan5g0473 | 415 | SMART | serkin_6 | 14 | 294 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Lan5g0473 | 415 | MobiDBLite | consensus disorder prediction | 295 | 415 | - | - | |
| Lan5g0473 | 415 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 302 | IPR011009 | - | |
| Lan5g0473 | 415 | MobiDBLite | consensus disorder prediction | 336 | 359 | - | - | |
| Lan5g0473 | 415 | PANTHER | CELL DIVISION PROTEIN KINASE | 9 | 357 | - | - | |
| Lan5g0473 | 415 | MobiDBLite | consensus disorder prediction | 398 | 415 | - | - | |
| Lan5g0473 | 415 | Gene3D | Transferase(Phosphotransferase) domain 1 | 95 | 310 | - | - | |
| Lan5g0473 | 415 | PANTHER | CYCLIN-DEPENDENT KINASE D-2 | 9 | 357 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan5g0473 | Lan-Chr5 | 10112285 | 10116588 | Dispersed/Wgd |
Transcription factors information