Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0452 ATGAGAGAAATTCTTCACATTCAAGGAGGCCAATGCGGTAACCAAATCGGTTCCAAGTTTTGGGAAGTAATCTGCGACGAACACGGCATCGATCATACTGGAAAGTACATCGGCGACGGTAGCGGTTCCGATCTCCAACTCGAGCGAATCAATGTCTACTACAACGAAGCCTCTGGTGGGAGGTACGTTCCGAGAGCGGTTCTTATGGATCTTGAACCTGGAACCATGGATAGCATCAGATCTGGTCCGTACGGTAAGATCTTTCGACCTGATAACTTCGTGTTCGGACAATCCGGTGCGGGGAATAACTGGGCGAAAGGTCATTACACTGAAGGCGCTGAGTTGATTGATTCGGTTCTCGATGTTGTTCGTAAAGAGGCTGAGAATTGTGACTGCTTGCAAGGTTTTCAAGTTTGTCACTCACTTGGAGGCGGCACTGGTTCTGGCATGGGAACTCTCTTGATATCAAAGATCAGGGAGGAATACCCTGACAGAATGATGCTCACTTTCTCTGTTTTCCCTTCTCCAAAGGTCTCTGACACAGTTGTGGAGCCATACAATGCCACTTTATCCGTGCACCAGCTTGTAGAGAATGCAGATGAGTGCATGGTCCTTGATAATGAAGCACTTTATGACATTTGCTTCAGGACTTTAAAACTCAGCACTCCTAGTTTTGGTGATCTGAACCATCTGATTTCTGCAACTATGAGTGGAGTTACCTGTTGCTTAAGGTTTCCTGGTCAACTTAACTCTGATCTAAGGAAGCTAGCTGTCAATCTGATCCCATTCCCTCGTCTTCACTTCTTTATGGTGGGATTTGCACCTCTCACATCCCATGGATCCCAGAAGTATGTCTCCCTCACTGTCCCAGAACTGACCCAGCAAATGTGGGATGCCAAGAATATGATGTGTGCTGCTGATCCTCGTCACGGTCGATACTTGACAGCATCTGCCATGTTCCGTGGGAAAATGAGCACTAAGGAGGTGGATGAACAAATGATTAATGTGCAGAACAAGAACTCATCATACTTTGTTGAGTGGATTCCTAACAACGTGAAATCCAGTGTTTGTGACATTCCACCCCGGAATTTGACAATGTCAAGTACTTTTATCGGTAACTCCACATCAATCCAGGAGATGTTTAGGAGGGTTAGTGAGCAATTCACTGCTATGTTCCGGCGCAAAGCTTTCTTGCATTGGTATACTGGGGAAGGAATGGACGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAATGATTTGGTAGCTGAGTACCAGCAATACCAGGATGCAACTGCTGAGGAAGATGAGTACGAAGATGAGGAGGAAGACAATTACGATGAGCAGTAG 1350 0.4622 MREILHIQGGQCGNQIGSKFWEVICDEHGIDHTGKYIGDGSGSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSHGSQKYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRNLTMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEDEYEDEEEDNYDEQ* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0452 449 Gene3D - 266 376 IPR037103 -
Lan5g0452 449 Coils Coil 411 441 - -
Lan5g0452 449 SUPERFAMILY Tubulin C-terminal domain-like 247 432 IPR008280 -
Lan5g0452 449 Pfam Tubulin C-terminal domain 264 385 IPR018316 -
Lan5g0452 449 Gene3D Tubulin/FtsZ, GTPase domain 1 265 IPR036525 -
Lan5g0452 449 PRINTS Beta-tubulin signature 215 227 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 248 261 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 268 284 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 111 129 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 44 61 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 350 373 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 155 167 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 332 346 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 380 391 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 91 102 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 314 332 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 415 433 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Beta-tubulin signature 233 242 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 CDD beta_tubulin 2 429 - -
Lan5g0452 449 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Lan5g0452 449 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 143 149 IPR017975 GO:0005525|GO:0005874|GO:0007017
Lan5g0452 449 SMART Tubulin_C_4 249 386 IPR018316 -
Lan5g0452 449 PANTHER TUBULIN 1 443 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PANTHER TUBULIN BETA-1 CHAIN-RELATED 1 443 - -
Lan5g0452 449 PRINTS Tubulin signature 135 153 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 96 107 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 154 175 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 193 213 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 179 192 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 54 73 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 109 133 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 PRINTS Tubulin signature 373 401 IPR000217 GO:0005874|GO:0007017
Lan5g0452 449 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 246 IPR036525 -
Lan5g0452 449 MobiDBLite consensus disorder prediction 430 449 - -
Lan5g0452 449 SMART Tubulin_4 50 247 IPR003008 GO:0005525
Lan5g0452 449 MobiDBLite consensus disorder prediction 426 449 - -
Lan5g0452 449 Pfam Tubulin/FtsZ family, GTPase domain 3 214 IPR003008 GO:0005525
Lan5g0452 449 Gene3D Helix hairpin bin 377 433 IPR023123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0452 Lan-Chr5 9852093 9855236 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0452 5 9852093 9855236 Lan3g0439 3 3833101 3835971 LSH