Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0446 ATGGACCGACGGTGGCCGTGGAGGAGAAAATCAACTGATAAAGCTGTGCTTGATAAAGTTGCAACTGAATTGGACTCAGTTGCTTCAATTCAGAGGAATCAGGAAACTTATAAGAAGCCAAACTATGTCCAAATCTCTATGGAATCATATACATATCTGACTGGTTTGGAGGATCAAGTTCAGACATATGAAGAGAAAGTTCAGGAACTGGAGGATGAGATCACAGAATTGAAAGAAAAATTGTCAGCAGCGAACTCGGAGATAAATACCAAAGAAACATTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAAGCTTTGGCGTTGAAGAACCATCTAGAATCTACCACTCTCTCAAAACTCACCACTGAGGACCATTCAGCGCAGTTAGATGGTGCTCTTAAAGAATGCATGCTTCAGATAAGAAACTTGAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTTGCAAAAACCAAGCAATTTGACAAGATTAAGGGTGAGCTTGAGGCAAGGTTAGGTAACTTTGAACAGGAGCTCCTCAGGTCTGCTGCTGAAAATGCAGCTCTATCAAGGTCCTTGCAGGAGAGGTCTAACATGCTGATGAGAGTAAACGAAGAAAAATCTCGCGCTGAGGCTAAAATTGAGCATCTTAAGAGCAACATAGAATCATGTGAAAGAGAAATCAATTCTCTTAAATATGAACTTCATCTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATGCGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAGTGCCAAAGATTACGTGGTCTAGTACGGAAAAAGCTACCTGGTCCTGCTGCACTTGCACAAATGAAGTTAGAAGTTGAAAATCTTGGTCGAGAATATGGAGATACTCGATTAAGGAAGTCTCCTGTCAAATCTGCTAATCCTCATCTGTCACCATTCCCTGAGTTTTCCCTTGAGAATGTACAGAAATTCACGAAGGATAACGAATTTCTTACAGAGCGTTTATATGCAGTTGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAATAGTGAACTGCAGGCCTCCCGGAGCATGTGTGCTAAAACACTAGGCAAGCTTCAAATTTTGGAAGCACAAGTGTCGAGTAATCAGCAGAAGGGATCTCCAAAATACATGCATTTAACCCATGAAAGCATTCACAGTCGAAGCGCAAGCTATGCACCAAGCTTAATCTCCATGCCTGAAGATGGAAATGATGATGCTGTAAGTTGTGCTGAGTCTTGGTCTACAGCATTAATCTCTGACCTATCCCAATTCCCAAAAGAAAAGAGTGCTTTGGATTTGAGCAAATCTGAAGACGCTAAAAAGTTGGAACTAATGGATGACTTTTTAGAGGTGGAAAAGTTGGCTCGTTTATCAAATGACTCTGATGGGGATGCCTCTGTTCCAGTTTCATCAAACAATAAGACATCTGAAATTGTGATCAATGGTGTATCAGAAGTCAGCAATGGCAAAGATGATCCCTCTGAAAAGAAGAGTGATTCAAATTCATTGCCAAGCCAAGTGTCTTCTGGTTCAGAATTGTCTGCACCTGATCACCAACCTGATGTTGATGGCTCATCACAAGCTGTGCTTCGATCAAAAATATTATCAGTTTTTGAGTCTATAGCTAAGGATGCTGATATAGGGAAGATCCTGGAAGAGGTCAAACATGTTCTTGAAGATGCACATGACACTTCCATCAAACACTCTGTAGCTGTCATTCCCCAGGATGTCAAGCCTTGTGATACTACATGTGATAAGCAGGATAATCTTGAAGATGCCGGTTTAAATTTTGCTAAAGAACTCATATCATCCGAACAACCGGCAGAATATCTGCAGTTAACTTCAGATCTAGAAGCTGCAGTTTCTCATATTCACAATTTTGTATGCTTCCTTGGCAGAGAAGCAATGGCAGTTCATGACATATCTTCTAATGGAAATGGAATAAGCAAAAAAATGGAGGAGTTCTCTGTCACCTTTAATAAAGTTATAACCAAGAACACAAGTTTACAACAGTTTGTTCTTGACCTGTCATATGTTTTAGCTAAAGCAAGTGAGTTCAGATTTAATATCCTTGGTTACAAGGGTACGGAAACTGAAACTAACAGTCCTGATTGCATAGATAAGATTGCTTTGCCTGAAAATAAGTTAGCTCAAAACAGTTCATCCGGAGAAAGATATCAAAATGGTCATTCCCATATTCGTAATCCTTGTTCTGATCCTGAGATTCCTGGTGATGGAAATTTGATATCAGACTGCAAATCAAATGCTACATCACAAAAGTTTTCGATAGAGGAATTTGAAGAGTTGAAGTTAGAGAAAGAGAAGGCGGTAGAGGATCTGTCAAAATGTGCTGAAAAACTTGAAATGACAAAGTCTGAATTACTAGTGACTGAGCAGCTTCTAACTGATGTTAAATCCGAATTGGCTTCTGCTCAAAGATCAAACAGCTTGGCCGAGACGCAACTAAAATGTATGGCAGAGTCATACAGGTCACTTGAAACACGTGCACTGGAGACTGAAACTGAGCTTAATCGTCTGCGAGTGGAGACTGAAACTCTGGAGAATCAACTGACTCATGAAAAGAGGGCTCGTGAAGCAGCTTTGACCAAGCACAAGGAGCTAGAAGATCAATTGCAAAGGTATAAGAGTTCAGCTTCTGATAGTGACCATAAGACTAAGCAGGAGAGAGATGTGGCAGCTGCCACTGAAAAGCTAGCCGAGTGTCAGGAAACCATATATCTTCTTGGCAAGCAGTTAAAAGCTCTGCATCCGCAAACAGAGCCAATGGGATCTTTGTACGGCGAGAAAGTTCCAATGATTGAGGGATTCACAGAGACTGAACCTAATTCTAATAGCCCAAATTTGCAAGAGTTAGATCAAGTGGAGATGGGCAGTGCTGCTTCTGTTTTTGTGCAAAGACCAGGGGTAGAGTCCCCCTTGCATTTTATTAACGCTTTATTTAGCCCCGATAATGAGCCAAACTTTCGAGCGATATCTCCAGTACAGCATCCAAAACACAGGTATACCATGTCAGCCTCTTCCTCAACTTCTTCCACTCCTACACCGGAGAAACATGCTCGAGGTTTTAGTAGATTCTTTTCAAAAGCAAAAGCGAAGGCAGGTCATTGA 3246 0.4097 MDRRWPWRRKSTDKAVLDKVATELDSVASIQRNQETYKKPNYVQISMESYTYLTGLEDQVQTYEEKVQELEDEITELKEKLSAANSEINTKETLVKQHAKVAEEAVSGWEKAEAEALALKNHLESTTLSKLTTEDHSAQLDGALKECMLQIRNLKEEHEQKIQEVALAKTKQFDKIKGELEARLGNFEQELLRSAAENAALSRSLQERSNMLMRVNEEKSRAEAKIEHLKSNIESCEREINSLKYELHLISKELEIRNEEKNMSMRSAEAANKQHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGREYGDTRLRKSPVKSANPHLSPFPEFSLENVQKFTKDNEFLTERLYAVEEETKMLKEALAKRNSELQASRSMCAKTLGKLQILEAQVSSNQQKGSPKYMHLTHESIHSRSASYAPSLISMPEDGNDDAVSCAESWSTALISDLSQFPKEKSALDLSKSEDAKKLELMDDFLEVEKLARLSNDSDGDASVPVSSNNKTSEIVINGVSEVSNGKDDPSEKKSDSNSLPSQVSSGSELSAPDHQPDVDGSSQAVLRSKILSVFESIAKDADIGKILEEVKHVLEDAHDTSIKHSVAVIPQDVKPCDTTCDKQDNLEDAGLNFAKELISSEQPAEYLQLTSDLEAAVSHIHNFVCFLGREAMAVHDISSNGNGISKKMEEFSVTFNKVITKNTSLQQFVLDLSYVLAKASEFRFNILGYKGTETETNSPDCIDKIALPENKLAQNSSSGERYQNGHSHIRNPCSDPEIPGDGNLISDCKSNATSQKFSIEEFEELKLEKEKAVEDLSKCAEKLEMTKSELLVTEQLLTDVKSELASAQRSNSLAETQLKCMAESYRSLETRALETETELNRLRVETETLENQLTHEKRAREAALTKHKELEDQLQRYKSSASDSDHKTKQERDVAAATEKLAECQETIYLLGKQLKALHPQTEPMGSLYGEKVPMIEGFTETEPNSNSPNLQELDQVEMGSAASVFVQRPGVESPLHFINALFSPDNEPNFRAISPVQHPKHRYTMSASSSTSSTPTPEKHARGFSRFFSKAKAKAGH* 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0446 1081 Coils Coil 805 825 - -
Lan5g0446 1081 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1081 - -
Lan5g0446 1081 Coils Coil 930 950 - -
Lan5g0446 1081 Pfam Filament-like plant protein, long coiled-coil 91 968 IPR008587 -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 538 554 - -
Lan5g0446 1081 SUPERFAMILY Tropomyosin 804 963 - -
Lan5g0446 1081 Coils Coil 137 171 - -
Lan5g0446 1081 Coils Coil 868 923 - -
Lan5g0446 1081 Coils Coil 205 288 - -
Lan5g0446 1081 Coils Coil 53 94 - -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 1049 1081 - -
Lan5g0446 1081 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1081 - -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 909 937 - -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 1049 1063 - -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 498 565 - -
Lan5g0446 1081 MobiDBLite consensus disorder prediction 502 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0446 Lan-Chr5 9741255 9747161 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0532 10 4272045 4278567 Lan5g0446 5 9741255 9747161 LSH
Lan5g0446 5 9741255 9747161 Lan14g0948 14 15875468 15880660 PCT
Lan14g0948 14 15875468 15880660 Lan5g0446 5 9741255 9747161 PCT