Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0443 ATGGAAGGTGTTGATCAAAGAACTAATTGTGCATTTGGATCGCCTGGAACGTTTCATAGACCACAAAGCAGATTGAATCCTCTCAATCAAATGGGTATTCCACCCTTTTACCCTAATAGTAATAATAATTTGCCTTCGAGTTTAAACCATTATCCCCAAATTTTGGCCTCACAGCCCCAGAGATTGCAGTCTTTGAATCTGAACCCTTTGAATTTGAGCCCTGGGGCAGGGTCATTATCCCATTCTATGTCTTTGTCTCAGCCCTCATTTTTTTCTCTGGATTCCTTGCCTCCTTTGAGCCCTTCGACTTATCAACTCTCGGCTGCTACCCCATTTGTTGGATCGGTCTCAGCAAATGTGTCTATGGAGAAAAGCTTAGGTAATGTAACTTCTGTGCCTGTTAACCGTGGTCATGCTGTTCAGCTTGGCAATAGTCTTCCCCCTCGTAAGGGACATAGGCGCTCGAGCAGTGATTCCCCTCTAGGAATCTCTGATTACATTCAGTCTATTCCTCAGTTTGTTTCATCCACTGCTTGGAATGATCGTAACAATTTGGTTTCAAGAGGAGAAAGCTTGGGTTTTGAGAAGAAGCCGGTTCAGTTAGTGTTGAAGGTGCCAAATAAGGATAAGGACCATGTTGATGGCTTTAGCGGAGAAACAGGGAAAGTGAGGAAAGAGGAATCGGTGGATGACATATTTAGTGCATACATGAATTTGGACAACATTAATAATATGGGTTTTTCTACAGAAGATAAGGATATGGATAGCAAAACTAGTGGTACCAAGACAGTTGAAAGCAGTGAGAATGAAGTTGAGAGTTGTGCAAATGGGAAAACAACCGGTGCTCGGGGGGAAAGTTCAAGCTGCTCTGAAGAACGCAAGGAAGGAGTGAAGAGGAGTTCGAATGGAGACATTGCACCTGGTTCCCGACACCGGAGGAGTTTCTCATTGGATAGTTCCATTGGAAATTTTAGTATTGAAGATGAATCACCCAAGCTTCCTCCTTTGCAAAATCGAGTTGGTCAACACTTGCCAAGCAATCCGATAGACGGTAAAACATGTGAACCCAGATTGGATTTTGGAAATGGAGAGTTCAGCTCTGAGGAGCTAAAGAAAATAATGGAAAATGATAAGCTTTCTGAAATTGCAATGTCTGATCCCAAGCGTGCAAAAAGGGTTTTGGCTAATCGTCTATCTGCTGCACGCTCGAAAGAGCGGAAGACGCAATACATTTCTGAATTGGAGCACAAGGTTCAAACTCTTCAGATAGAGACAACCACATTGTCTACTGAGTTTACTAAATTACAGATGGATAGCGCAGAGCTTAAAAGTCAGAATAACGAGTACAAATTGAGGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTCTGAAGGAGACCTTAGATACTGAGGTCCGGCGTTTAAGGCGCACTGTTGCTGACCTCGGTGGAGAGTCCCTCCTCTCTAGTCGCATGGCTCAACAGCTTGCTATCAACCAACAAATGTTCCAGTTACAGCACCAACAACAGGCCAGCCAAATAAGACAATTTCAACAGCAGAACAGCCATCCTCAGCAAGAGCCACAGTCTCAGCCACAGAAGACTCAGCACAATAATGAATTGCAATCACAGCGACAGAATGGCAAAGCTTCTGCTTACTGA 1668 0.4388 MEGVDQRTNCAFGSPGTFHRPQSRLNPLNQMGIPPFYPNSNNNLPSSLNHYPQILASQPQRLQSLNLNPLNLSPGAGSLSHSMSLSQPSFFSLDSLPPLSPSTYQLSAATPFVGSVSANVSMEKSLGNVTSVPVNRGHAVQLGNSLPPRKGHRRSSSDSPLGISDYIQSIPQFVSSTAWNDRNNLVSRGESLGFEKKPVQLVLKVPNKDKDHVDGFSGETGKVRKEESVDDIFSAYMNLDNINNMGFSTEDKDMDSKTSGTKTVESSENEVESCANGKTTGARGESSSCSEERKEGVKRSSNGDIAPGSRHRRSFSLDSSIGNFSIEDESPKLPPLQNRVGQHLPSNPIDGKTCEPRLDFGNGEFSSEELKKIMENDKLSEIAMSDPKRAKRVLANRLSAARSKERKTQYISELEHKVQTLQIETTTLSTEFTKLQMDSAELKSQNNEYKLRLQALEQQSQLKDALKETLDTEVRRLRRTVADLGGESLLSSRMAQQLAINQQMFQLQHQQQASQIRQFQQQNSHPQQEPQSQPQKTQHNNELQSQRQNGKASAY* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0443 555 MobiDBLite consensus disorder prediction 247 316 - -
Lan5g0443 555 MobiDBLite consensus disorder prediction 140 161 - -
Lan5g0443 555 PANTHER BZIP TRANSCRIPTION FACTOR 69 555 - -
Lan5g0443 555 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 69 555 - -
Lan5g0443 555 MobiDBLite consensus disorder prediction 511 555 - -
Lan5g0443 555 SMART brlzneu 384 448 IPR004827 GO:0003700|GO:0006355
Lan5g0443 555 Gene3D - 388 439 - -
Lan5g0443 555 MobiDBLite consensus disorder prediction 10 41 - -
Lan5g0443 555 Pfam bZIP transcription factor 388 446 IPR004827 GO:0003700|GO:0006355
Lan5g0443 555 SUPERFAMILY Leucine zipper domain 388 444 IPR046347 GO:0003700|GO:0006355
Lan5g0443 555 MobiDBLite consensus disorder prediction 1 41 - -
Lan5g0443 555 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 386 449 IPR004827 GO:0003700|GO:0006355
Lan5g0443 555 MobiDBLite consensus disorder prediction 260 286 - -
Lan5g0443 555 Coils Coil 404 424 - -
Lan5g0443 555 CDD bZIP_plant_RF2 389 440 IPR044759 GO:0003700|GO:0006355
Lan5g0443 555 Coils Coil 439 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0443 Lan-Chr5 9690934 9696030 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan5g0443 bZIP_1 7.5e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0537 10 4352914 4356469 Lan5g0443 5 9690934 9696030 LSH
Lan5g0443 5 9690934 9696030 Lan3g0453 3 4083625 4087735 LSH