Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0437 ATGGGAGCAGCTTGTTGTGTTCCCATAAAGAATCATAGTCTTCCTAACATAACTGAAGGTGAAGGCTTGCATAGAGATGTTGTATGTTCACCATCATGGAGCTTTCAATGGGATAGTCAGGGGCATGTTGCTGGTGAAATTGAGAATACTCCCTATCATGTGTCTCGTGTAGTCAGAAGGAATGTCAGCATGGAGTTAAAAGGTTCGTTAAGTTCTGAAAGAGGTAATTTATCTGATGAGGGAAGCACTCTGGAGAGTTCTGTAACTCCTATTTCTCTCAAGTCCCCTGCTGATGAGGCACTGGTTGCCAATCTGATGACTCCATCGCCCGATCTGTCCATATCAAGCAATTTTTCTACAGTGGTGAAGAATCCATCAGAATCTTCAAGGCGAAATCTTTCATTTTCAATATCTTCAGTTCTTTCAACACCGACAGCAGATCCTTTGCCCAATCATAATTATCATCATCTTCCCAACTCTATGCCATCAAGATGGGCACATCGTTCTCCAGGACACCCACTGTTGAGGCAGGTTTCAGATAGTCGAATATTGGGCCTGAAGTCACCAGACAACTCAATTTCTGAAGGAAGGCCATCGTTTGTACTCTCCGCTTGCAGCAATGAAATGGCAGCTGGATCCCAATGTGGATCATCTGATGGCTGGTCCATACGCACCTTTTCTGAGCTGGTGGCCTCATCTCAAAGGGAACGGTGGTCTTTTGACAGTGAGCATTTCGGCTCAGGTCGTCACAAGATTAGTGGATCCAGTAGCAGGTTCTCATATTCTCCCTCAATGGATCTACAATCTTGTGGTGCTTGCTCAAAGCTTTTGACAGAGAGATCAACAAGGAATAGCCAGAAGTTTATTGCCAACAATGACCTTTCAGTTGTTGCGGTGCTGGTCTGTGGTCATGCATATCACGCAGAATGCTTAGAGACTATGACACAAGAAGCAGATAAGTATGATCCAGTCTGTCCAAGTTGTATGGCTGGTGATAAACACTTGTCAAAGTTGTCCAGAAAAGGTTTTCGCACTGATTCGGATATAAAGGCCAAGAACCACAGGATATCCAGAAACAGTGTAATTGATAGCTATGTTGATGGTGACTTTGATGTTTTTTATCACCAAAAAGATATCGATCGAGGAGGAGAAGTGTCAAAGATGGAACCTAGCTCAAGCGCTAGCAGCTCATTTGGAAAGCCCTTCCTAAGGAGGCACTTTTCACTTGGGTCCAAGTGGAACCGATCTCTGTCGGAGAATGATTCTGGTAGGAAGAAAGGCTTCTGGGCGAGATATCGAAAAGATTGA 1308 0.4427 MGAACCVPIKNHSLPNITEGEGLHRDVVCSPSWSFQWDSQGHVAGEIENTPYHVSRVVRRNVSMELKGSLSSERGNLSDEGSTLESSVTPISLKSPADEALVANLMTPSPDLSISSNFSTVVKNPSESSRRNLSFSISSVLSTPTADPLPNHNYHHLPNSMPSRWAHRSPGHPLLRQVSDSRILGLKSPDNSISEGRPSFVLSACSNEMAAGSQCGSSDGWSIRTFSELVASSQRERWSFDSEHFGSGRHKISGSSSRFSYSPSMDLQSCGACSKLLTERSTRNSQKFIANNDLSVVAVLVCGHAYHAECLETMTQEADKYDPVCPSCMAGDKHLSKLSRKGFRTDSDIKAKNHRISRNSVIDSYVDGDFDVFYHQKDIDRGGEVSKMEPSSSASSSFGKPFLRRHFSLGSKWNRSLSENDSGRKKGFWARYRKD* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0437 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 256 331 IPR013083 -
Lan5g0437 435 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 1 429 - -
Lan5g0437 435 SUPERFAMILY RING/U-box 265 330 - -
Lan5g0437 435 MobiDBLite consensus disorder prediction 418 435 - -
Lan5g0437 435 MobiDBLite consensus disorder prediction 68 91 - -
Lan5g0437 435 ProSiteProfiles Zinc finger RING-type profile. 270 328 IPR001841 -
Lan5g0437 435 PANTHER EXPRESSED PROTEIN 1 429 - -
Lan5g0437 435 SMART ring_2 270 328 IPR001841 -
Lan5g0437 435 MobiDBLite consensus disorder prediction 413 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0437 Lan-Chr5 9537637 9541026 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0555 10 4595806 4599026 Lan5g0437 5 9537637 9541026 LSH