Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0430 ATGGTTTTGCAAAGAAGACTAACACTGAGTGTAGTTATAATGTTACTGTTTGTTCAGTTAGGTTTTTGTTTGAATTCTAGAACAGAATGGTTATCATTTCTGGAACTTCGTTCATCATTAGGGATAAGGGGAAAAGATTGGCCTTTAAAAGCCGAACCTTGCCGGAATTGGACTGGAGTTCAGTGCAGGAATGGTCGAGTTATTGGGATCAACATATCCGGGTTGAAACGAACCCGAATTGGTCGTGTTCATCCAAGTTTTGATGTTGATGCTCTTACCAATTTAACAGCTTTAGCTTCATTTAATGCTTCTGGGTTCATGCTAAATGGGTCAATACCTGATTGGTTTGGTCAAAATCTTAGTGCAATGGAAGTGCTTGATCTAAGGTCTTGTTCTATAACTGGTTTGATTCCTGAGTCACTTAAGGGTTTGAGTGTGTTGAAGACTTTGTTACTTTCGGGGAATAGTTTAACTGGTAGAATGCCTTCAAGTTTGGGATTGTTATCTGAGCTATCAGTTCTTGATCTCTCTGGGAATTCACTTTCAGGATCAGTGCCTAACGCTTTGTCGAAGCTTGGTAATTTAACAAAGCTTGATCTTTCTTCTAATTTCTTATCCGGGTCTATTCCACCCGAACTAGGCTCCCTTTCGAACCTCCATATTTTGAACCTTTCTGACAATGAACTCACTGCTTCAGTCCCTGTTCAACTCGGCAACCTTTCCAAGCTGGTTGAGCTTGACCTTGGGATGAATTCACTGTCTGGTTCATTGCCAGATAGTTTATTTTCGTCATGGTCATTGCCTAGCTTGCATGTTCTTGATGTGTCCAGCAACAATCTCACTGGTCCCCTACCGAAATTCTCCAATGTTAGTTCTGCTGGTGCCATATTCAATCTTTCAAACAATTTGTTCTACGGATCTTTGAATACTTCGTTTACCAAGTTTAAAATGATTGATTTGTCCGGTAATTATTTGGAAGTTGTGGTGCAAGGTGGTGGTAATGTTACTCTAACTAAGAATTGCTTACAGATGATTCCAGACCAAAGGGATTCGGAAGATTGTAGACTGTTTTATGCTCAAAGAAGTTTACCCTTTGCTCCTGGGATCCAAGAACCAACTCAATCGCCGTTCCAAGAATCCAGATCCAGGAACAACAAACGAGTGACATTCATACTGGCAGGTACATTTGGTGGACTTGGCTTTATTGTGCTTGTAGCATTGGTCCTTATACTGGTTCTAAGACATTGTACTAATCATAGTACTTTGGCAATTGAAAGAGGGACCGCGAATGGGGGGGCTGTTCCGGAAGGGGAAAGTCCTACACCTCCCAAGGATCCTGTCTTTGTAACTAGTGTGGGAAAATCATTTACTTTTGAGCAAATTCTCCATTTGACCGGTAATTTTGCGGAAGCAAATATCATGAAGCATGGTCATTCTGGAGACCTCTACTGGGGAGTATCGGAAGGTGGAGCAATTGTGGTTATCAAAAAAGTGGATTTAAATTTATTTAAGAGAGAATCATATATTGTAGAATTGGGATTATTAAGCAAGGTTTCTCATGCAAGATTGGTCCCAATCCTAGGGCACTGCTTGGAGAATGAGAATGAGAAATATATAATTTACAAGTACATGCCAAATGGAGATTTGGTTACTTCGTTGCACAGAGTCACCGGTTCAGATGGTAAATTACAGTCCCTGGATTGGATCACGAGATCGAAAATTGCAATAGGAGCTGCTGAAGGCCTAGCTTACCTACATGAGTGCAGCCCTCCCATTGTTCACAGAGATATCCAAGCTAGCAGTATACTTCTTGACGATAAATTTGAAGTGCGGCTGGGAAGTTTGAGCGAGGTTACTTGCCAAGGAGATTTTCATCAGAGTGCCTTCTCGAGGCTTTTCAGCAAACCACTATCTTTTAATCAAGGAAATCCTGGTACATCATCTGTGAGTAGTGACTATGATGTCTATTGTTTTGGGAAGATTTTACTGGAGCTAGTTACCGGTAACCTCGATATCAGCAATTCCGACGACGCCATGACAAAAGAGTGGTTAGAACAAACCTTGTCTTACATAACCATATATGATAAAGAAAGGGTGACTAAGATTTTAGACCCATCTTTGATCATAGATGAGGACCTATTGGAAGAGGTATGGGCTATGGCAATCGTTGCAAGATCATGCTTGAATCCGAAGCCTTCGAAACGTCCTCTCATGAGACATGTCCTCAAAGCACTAGAAAATCCGTTGAAGGTTGTTAGAGAAGACAATGGTAGCTCGGAAAGGTTGAGAACAACTTCATCTAGGAGATATTGGAGCAGTGCATTATTTGGTAGCTGGAGACATAGCTCATCAGAGAATGCTACTGCTACAGGGAATGCAAAAGAGGGTACTAGTAGCTTTAAACAATCATGTAGGGTAGGGTCTCAGCGTAGTGTTGGATTTGATCATTCATCTTCAAATAAAAGGTCATCCAATGAAATATTCCCGGAACCGTTCGAAATGCAAGAGGTGGAGATTGGAGAGGGGAGATGA 2532 0.4131 MVLQRRLTLSVVIMLLFVQLGFCLNSRTEWLSFLELRSSLGIRGKDWPLKAEPCRNWTGVQCRNGRVIGINISGLKRTRIGRVHPSFDVDALTNLTALASFNASGFMLNGSIPDWFGQNLSAMEVLDLRSCSITGLIPESLKGLSVLKTLLLSGNSLTGRMPSSLGLLSELSVLDLSGNSLSGSVPNALSKLGNLTKLDLSSNFLSGSIPPELGSLSNLHILNLSDNELTASVPVQLGNLSKLVELDLGMNSLSGSLPDSLFSSWSLPSLHVLDVSSNNLTGPLPKFSNVSSAGAIFNLSNNLFYGSLNTSFTKFKMIDLSGNYLEVVVQGGGNVTLTKNCLQMIPDQRDSEDCRLFYAQRSLPFAPGIQEPTQSPFQESRSRNNKRVTFILAGTFGGLGFIVLVALVLILVLRHCTNHSTLAIERGTANGGAVPEGESPTPPKDPVFVTSVGKSFTFEQILHLTGNFAEANIMKHGHSGDLYWGVSEGGAIVVIKKVDLNLFKRESYIVELGLLSKVSHARLVPILGHCLENENEKYIIYKYMPNGDLVTSLHRVTGSDGKLQSLDWITRSKIAIGAAEGLAYLHECSPPIVHRDIQASSILLDDKFEVRLGSLSEVTCQGDFHQSAFSRLFSKPLSFNQGNPGTSSVSSDYDVYCFGKILLELVTGNLDISNSDDAMTKEWLEQTLSYITIYDKERVTKILDPSLIIDEDLLEEVWAMAIVARSCLNPKPSKRPLMRHVLKALENPLKVVREDNGSSERLRTTSSRRYWSSALFGSWRHSSSENATATGNAKEGTSSFKQSCRVGSQRSVGFDHSSSNKRSSNEIFPEPFEMQEVEIGEGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0430 843 Gene3D Phosphorylase Kinase; domain 1 442 543 - -
Lan5g0430 843 Pfam Leucine Rich Repeat 124 144 IPR001611 GO:0005515
Lan5g0430 843 Gene3D Ribonuclease Inhibitor 188 347 IPR032675 -
Lan5g0430 843 SMART LRR_typ_2 267 289 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 216 239 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 144 167 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 168 191 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 120 143 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 192 215 IPR003591 -
Lan5g0430 843 SMART LRR_typ_2 240 264 IPR003591 -
Lan5g0430 843 PANTHER RECEPTOR-LIKE PROTEIN 55 265 802 - -
Lan5g0430 843 PANTHER RECEPTOR-LIKE PROTEIN 55 6 261 - -
Lan5g0430 843 MobiDBLite consensus disorder prediction 783 826 - -
Lan5g0430 843 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Lan5g0430 843 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Lan5g0430 843 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 265 802 - -
Lan5g0430 843 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 6 261 - -
Lan5g0430 843 SUPERFAMILY Protein kinase-like (PK-like) 443 745 IPR011009 -
Lan5g0430 843 ProSiteProfiles Protein kinase domain profile. 468 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0430 843 PRINTS Leucine-rich repeat signature 171 184 - -
Lan5g0430 843 PRINTS Leucine-rich repeat signature 216 229 - -
Lan5g0430 843 Gene3D Transferase(Phosphotransferase) domain 1 544 766 - -
Lan5g0430 843 Pfam Protein kinase domain 476 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan5g0430 843 Pfam Leucine rich repeat 147 203 IPR001611 GO:0005515
Lan5g0430 843 MobiDBLite consensus disorder prediction 783 843 - -
Lan5g0430 843 SUPERFAMILY L domain-like 31 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0430 Lan-Chr5 9311938 9316704 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lan5g0430 Pkinase 2.5e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0573 10 4824534 4829828 Lan5g0430 5 9311938 9316704 LSH