Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0427 ATGGCAATCTTGGTCTCTCACTCTCCATTTCTTCTCCCATTCCTTGCTTTCTTTCTCTCATTTAACCTTGCTAATTCTGAACCATTCATTGGTGTGAACTATGGACAAGTCGGCAACAACTTGCCACCACCGTCAACCACCGCTAAACTGCTCCAGTCCACCGCCATCGAGAAAGTCCGATTATATGGATCAGACCCGGCCATAATAAAAGCACTAGCCAACACCGGAAAGGGAATCGTCATCGGAGCCGCAAACGGCGACGTTCCAGCACTTGCTTCAGACCCAAACTTCGCCAAAAGCTGGGTAGCCTCCAACGTCGTTCCATACTACCCCGCCAGCAACATCATCCTCATAACCGTTGGTAACGAGGTAATAACATCCAACGACCAGAACCTGATGAACCAGCTTGTGCCAGCAGTGCAAAATGTCCAAAATGCCCTTGATGCTGTTTCTTTGGGAGGGAAAGTGAAGGTCTCTACCGTCCATTCAATGGCGGTTTTGAGAGAATCTGAACCTCCTTCTGTTGGAAAGTTCCACCCCGAGTTCGACACCGTTTTGAAGGGGTTGTTGTCGTTTAATAATGCAACGGCTTCTCCCTTTGCTATTAATCCTTACCCTTACTTTGCGTTTAGGGATGATCCTGGAAGAGCTGAAAACTTGGAGTATTGCCTATTCCAGCCCAACTCGGGCCGAGTTGACTCAAACTCCAATCTCAAGTACATGAATATGTTTGATGCTCAGGTAGATGCTGTACGTTCTGCTTTGGATTCTCTGGGGTTTAAGAATGTGGAGATTGTTGTTGCTGAGACAGGGTGGCCATACAAAGGAGATAGCAATGAGGTTGGTGCAAGTCTTGAGAATGCAAAGGGTTACAATGGTGGTTTGATTTCTCACTTGAGATCCATGGTTGGAACCCCATTGATGCCAGGGAAATCAGTAGATACATACCTCTTTGCCTTATATGATGAGGACCTGAAACCTGGACCTGCTTCTGAGAGAGCCTTTGGACTTTACAACCCTGATCAATCCATGATCTATGATGCTGGCCTCTCCCAACAGAAGCAGATTAACATGACTAACCCAGTGGCGGCTCCGACTACTCCGGACCGGTCAAAATCTCCGGCCAGTCAAACACCAACAGTTACAAGTCCAGCAACACCAAAACCAGATAAAGCATCATGGTGTGTGCCAAAAGCAGGAGTGTCAAATGTGAACCTACAAGCAAATTTGGATTATGCTTGCGGTCACAGTATTGATTGTAGTCCAATTCAACCAGGTGGAGCATGTTTTGAACCAAACACATTACTAAACCATGCTGCATATGCTATGAATCTTTTCTATCAAGCTGCTGGACAAAATCCATTGACTTGTGATTTCTTGCAGACAGCAATGCTGTCGATGAATAATCCAAGTTACAATAATTGCGTGTATGCTGGAGGAAATGCCTAA 1449 0.4596 MAILVSHSPFLLPFLAFFLSFNLANSEPFIGVNYGQVGNNLPPPSTTAKLLQSTAIEKVRLYGSDPAIIKALANTGKGIVIGAANGDVPALASDPNFAKSWVASNVVPYYPASNIILITVGNEVITSNDQNLMNQLVPAVQNVQNALDAVSLGGKVKVSTVHSMAVLRESEPPSVGKFHPEFDTVLKGLLSFNNATASPFAINPYPYFAFRDDPGRAENLEYCLFQPNSGRVDSNSNLKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDSNEVGASLENAKGYNGGLISHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGPASERAFGLYNPDQSMIYDAGLSQQKQINMTNPVAAPTTPDRSKSPASQTPTVTSPATPKPDKASWCVPKAGVSNVNLQANLDYACGHSIDCSPIQPGGACFEPNTLLNHAAYAMNLFYQAAGQNPLTCDFLQTAMLSMNNPSYNNCVYAGGNA* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0427 482 Pfam Glycosyl hydrolases family 17 30 347 IPR000490 GO:0004553|GO:0005975
Lan5g0427 482 SMART X8_cls 393 477 IPR012946 -
Lan5g0427 482 SUPERFAMILY (Trans)glycosidases 30 348 IPR017853 -
Lan5g0427 482 Pfam X8 domain 394 464 IPR012946 -
Lan5g0427 482 PANTHER GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 15 468 - -
Lan5g0427 482 MobiDBLite consensus disorder prediction 360 387 - -
Lan5g0427 482 Gene3D Glycosidases 29 358 - -
Lan5g0427 482 Gene3D - 389 478 - -
Lan5g0427 482 MobiDBLite consensus disorder prediction 360 391 - -
Lan5g0427 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 468 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0427 Lan-Chr5 9270275 9277330 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0578 10 4909137 4912308 Lan5g0427 5 9270275 9277330 LSH