Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0421 ATGGCTAGTCGTAGAGACTCATTGCTTAACAGAGAAAAAGGACAATCCGGTCTCCGATCTCGAATTCTCGCCGCCGTCGTTGTCGGTGTTCTTCTCGGTTGCTTCTTCGCTTTCTTGTCACCGCATGGATTATTTGCCTCTTCTGATTCTCAAACCGATCACAATCTAAGTAATCGATTTTCTGAACAGGTGGTTTCATCTGAGTGTGAATCAACGGAACGAGTTAATGAGTTGAAATCAGATGTTCAGTCAGCCAAGGAGAAGAATTATGAACTCAAGAGGGAAGTAAGAAGTCTGAAGGAGAAATTGCTGCAGGCTGAGCAAGGAAAGGATCATGCACAGCAACAGGTTGTTGTGCTGGATGAGAAGCAGAAGGTTGGGCCATTTGGCACTGTCAAGGGTCTCAGAACGAACCCAACTGTCATTCCTGATGAATCTGTGAATCCCAGATTGGCGAAAATCTTGGAAAAAGTTGCCATTAATAAAGAAATTATAGCTGCACTGGCAAACAAAAATGTGAAGCAGGAGTTGGAGGTCTGGTTCACCAACATCAAGAGGGTTGGCATACCTAATTATTTAGTGGTTGCCTTAGATGACACAATTGAAGAATTCTGCAAATCAAATGATGTCCCAGTTTATAGAAGAGATCCAGATGAAGGTGTTGATAAAATTGCGAAGACAGGTAGCAACCATGCTGTCTCGGGATTGAAATTTCGCATTCTGAGAGAATTTCTACAACTGGGTTACAGTGTTCTTCTCTCAGATATTGATATTGTATACGTGCAGAACCCATTTGACCATCTTTATAGAGATTCAGATGTGGAGTCAATGTCTGATGGTCACGATTATGAGACAGCTTATGGGTTTAATGATGTCTTTGATGAACCCAAAATGGGTTGGGCTCGATATGCTCATACTACAAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCTACTCATCCTTCAATTGAGCTATTGGATCGTGTTGCTACCCGGCTTTCTTCAAACCCAAAATTGTGGGACCAGTCAGTTTTTAATCAAGAACTCTTTTACCCTTCCCACCCTGGTTATGATGGACTTCATGCTTCCAAAAGAACAATGGATATATACCTTTTTATGAACAGTAAGGTTCTCTTCAAGACTGTTAGAAAAGATGATGAACTTAAGAAGTTGAAGCCAGTGGTTATACATCTTAACTATCATCCTGATAAATTTGAAAGGATGAAGGCAGTAGTTAATTTCTACGTCAACGGAAAACAAGATGCGCTAGATGGTTTCCCAGATGGTTCTGAATGA 1305 0.4092 MASRRDSLLNREKGQSGLRSRILAAVVVGVLLGCFFAFLSPHGLFASSDSQTDHNLSNRFSEQVVSSECESTERVNELKSDVQSAKEKNYELKREVRSLKEKLLQAEQGKDHAQQQVVVLDEKQKVGPFGTVKGLRTNPTVIPDESVNPRLAKILEKVAINKEIIAALANKNVKQELEVWFTNIKRVGIPNYLVVALDDTIEEFCKSNDVPVYRRDPDEGVDKIAKTGSNHAVSGLKFRILREFLQLGYSVLLSDIDIVYVQNPFDHLYRDSDVESMSDGHDYETAYGFNDVFDEPKMGWARYAHTTRIWVYNSGFFYIRPTHPSIELLDRVATRLSSNPKLWDQSVFNQELFYPSHPGYDGLHASKRTMDIYLFMNSKVLFKTVRKDDELKKLKPVVIHLNYHPDKFERMKAVVNFYVNGKQDALDGFPDGSE* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0421 434 Coils Coil 75 116 - -
Lan5g0421 434 PANTHER GLYCOSYLTRANSFERASE 1 434 - -
Lan5g0421 434 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lan5g0421 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 369 IPR029044 -
Lan5g0421 434 Pfam Nucleotide-diphospho-sugar transferase 189 411 IPR005069 -
Lan5g0421 434 PANTHER ARABINOSYLTRANSFERASE RRA3 1 434 IPR044290 GO:0016757|GO:0080147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0421 Lan-Chr5 9199281 9202423 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0585 10 4974796 4977167 Lan5g0421 5 9199281 9202423 LSH